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    PCNT pericentrin [ Canis lupus familiaris (dog) ]

    Gene ID: 491613, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PCNTprovided by VGNC
    Official Full Name
    pericentrinprovided by VGNC
    Primary source
    VGNC:VGNC:82291
    See related
    Ensembl:ENSCAFG00845026638
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See PCNT in Genome Data Viewer
    Location:
    chromosome: 31
    Exon count:
    50
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 31 NC_051835.1 (39219042..39320435)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 31 NC_006613.4 (38805612..38906957)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 31 NC_049252.1 (39559470..39660821)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 31 NC_049291.1 (39080651..39182002)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 31 NC_049772.1 (39041590..39142922)

    Chromosome 31 - NC_051835.1Genomic Context describing neighboring genes Neighboring gene minichromosome maintenance complex component 3 associated protein Neighboring gene chromosome 31 C21orf58 homolog Neighboring gene ybeY metalloendoribonuclease Neighboring gene uncharacterized LOC106558110 Neighboring gene disco interacting protein 2 homolog A Neighboring gene S100 calcium binding protein B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pericentrin
    Names
    pericentrin (kendrin)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051835.1 Reference ROS_Cfam_1.0

      Range
      39219042..39320435
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038443740.1 → XP_038299668.1  pericentrin isoform X1

      UniProtKB/TrEMBL
      A0A8C0TBB4
      Conserved Domains (4) summary
      PTZ00121
      Location:2477 → 2918
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3076 → 3154
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    2. XM_038443744.1 → XP_038299672.1  pericentrin isoform X5

      UniProtKB/TrEMBL
      A0A8C0TBW2
      Conserved Domains (4) summary
      PTZ00121
      Location:2477 → 2918
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3036 → 3114
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    3. XM_038443746.1 → XP_038299674.1  pericentrin isoform X7

      UniProtKB/TrEMBL
      A0A8I3PWV9, A0A8P0PI54
      Conserved Domains (4) summary
      PTZ00121
      Location:172 → 876
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3011 → 3089
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    4. XM_038443741.1 → XP_038299669.1  pericentrin isoform X2

      UniProtKB/TrEMBL
      A0A8C0TBB4
      Conserved Domains (4) summary
      PTZ00121
      Location:2472 → 2913
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3071 → 3149
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    5. XM_038443742.1 → XP_038299670.1  pericentrin isoform X3

      UniProtKB/TrEMBL
      A0A8C0TBB4
      Conserved Domains (4) summary
      PTZ00121
      Location:2470 → 2911
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1547
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1727
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3069 → 3147
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    6. XM_038443743.1 → XP_038299671.1  pericentrin isoform X4

      UniProtKB/TrEMBL
      A0A8C0TBB4
      Conserved Domains (4) summary
      PTZ00121
      Location:2466 → 2907
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1594 → 1922
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1358 → 1723
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3065 → 3143
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    7. XM_038443745.1 → XP_038299673.1  pericentrin isoform X6

      UniProtKB/TrEMBL
      A0A8I3PWV9, A0A8P0PI54
      Related
      ENSCAFP00845036886.1, ENSCAFT00845047006.1
      Conserved Domains (4) summary
      PTZ00121
      Location:2477 → 2918
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3076 → 3154
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049291.1 Alternate UMICH_Zoey_3.1

      Range
      39080651..39182002
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038518157.1 → XP_038374085.1  pericentrin isoform X11

    2. XM_038518153.1 → XP_038374081.1  pericentrin isoform X6

      Conserved Domains (4) summary
      PTZ00121
      Location:2477 → 2918
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3076 → 3154
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    3. XM_038518158.1 → XP_038374086.1  pericentrin isoform X12

      Conserved Domains (4) summary
      PTZ00121
      Location:172 → 876
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3011 → 3089
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    4. XM_038518154.1 → XP_038374082.1  pericentrin isoform X8

    5. XM_038518155.1 → XP_038374083.1  pericentrin isoform X9

    6. XM_038518156.1 → XP_038374084.1  pericentrin isoform X10

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049772.1 Alternate UNSW_CanFamBas_1.0

      Range
      39041590..39142922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038646110.1 → XP_038502038.1  pericentrin isoform X1

    2. XM_038646114.1 → XP_038502042.1  pericentrin isoform X5

    3. XM_038646116.1 → XP_038502044.1  pericentrin isoform X7

    4. XM_038646111.1 → XP_038502039.1  pericentrin isoform X2

    5. XM_038646112.1 → XP_038502040.1  pericentrin isoform X3

    6. XM_038646113.1 → XP_038502041.1  pericentrin isoform X4

    7. XM_038646115.1 → XP_038502043.1  pericentrin isoform X6

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049252.1 Alternate UU_Cfam_GSD_1.0

      Range
      39559470..39660821
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038581705.1 → XP_038437633.1  pericentrin isoform X1

      UniProtKB/TrEMBL
      A0A8C0TBB4

    2. XM_038581709.1 → XP_038437637.1  pericentrin isoform X5

      UniProtKB/TrEMBL
      A0A8C0TBW2

    3. XM_038581711.1 → XP_038437639.1  pericentrin isoform X7

      UniProtKB/TrEMBL
      A0A8I3PWV9, A0A8P0PI54

    4. XM_038581706.1 → XP_038437634.1  pericentrin isoform X2

      UniProtKB/TrEMBL
      A0A8C0TBB4

    5. XM_038581707.1 → XP_038437635.1  pericentrin isoform X3

      UniProtKB/TrEMBL
      A0A8C0TBB4

    6. XM_038581708.1 → XP_038437636.1  pericentrin isoform X4

      UniProtKB/TrEMBL
      A0A8C0TBB4

    7. XM_038581710.1 → XP_038437638.1  pericentrin isoform X6

      UniProtKB/TrEMBL
      A0A8I3PWV9, A0A8P0PI54

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006613.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      38805612..38906957
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038461703.1 → XP_038317631.1  pericentrin isoform X1

      UniProtKB/TrEMBL
      A0A8C0TBB4
      Conserved Domains (4) summary
      PTZ00121
      Location:2477 → 2918
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3076 → 3154
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    2. XM_038461708.1 → XP_038317636.1  pericentrin isoform X5

      UniProtKB/TrEMBL
      A0A8C0TBW2
      Conserved Domains (4) summary
      PTZ00121
      Location:2477 → 2918
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3036 → 3114
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    3. XM_038461710.1 → XP_038317638.1  pericentrin isoform X7

      UniProtKB/TrEMBL
      A0A8I3PWV9, A0A8P0PI54
      Conserved Domains (4) summary
      PTZ00121
      Location:172 → 876
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3011 → 3089
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    4. XM_038461704.1 → XP_038317632.1  pericentrin isoform X2

      UniProtKB/TrEMBL
      A0A8C0TBB4
      Conserved Domains (4) summary
      PTZ00121
      Location:2472 → 2913
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3071 → 3149
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    5. XM_038461706.1 → XP_038317634.1  pericentrin isoform X3

      UniProtKB/TrEMBL
      A0A8C0TBB4
      Conserved Domains (4) summary
      PTZ00121
      Location:2470 → 2911
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1547
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1727
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3069 → 3147
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    6. XM_038461707.1 → XP_038317635.1  pericentrin isoform X4

      UniProtKB/TrEMBL
      A0A8C0TBB4
      Conserved Domains (4) summary
      PTZ00121
      Location:2466 → 2907
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1594 → 1922
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1358 → 1723
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3065 → 3143
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein

    7. XM_038461709.1 → XP_038317637.1  pericentrin isoform X6

      UniProtKB/TrEMBL
      A0A8I3PWV9, A0A8P0PI54
      Conserved Domains (4) summary
      PTZ00121
      Location:2477 → 2918
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:1017 → 1554
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1369 → 1734
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam10495
      Location:3076 → 3154
      PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
    Nucleotide Protein
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