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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001136478.4 → NP_001129950.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC242988
- Consensus CDS
-
CCDS44214.1
- UniProtKB/Swiss-Prot
-
Q9BTT0
- Related
- ENSP00000393718.2, ENST00000436748.6
-
NM_001136479.3 → NP_001129951.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform 3
See identical proteins and their annotated locations for NP_001129951.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and initiates translation at a downstream start codon compared to variant 1. The resulting isoform (3) is shorter at the N-terminus compared to isoform 1.
- Source sequence(s)
-
AC242988
- Consensus CDS
-
CCDS44215.1
- UniProtKB/Swiss-Prot
-
Q9BTT0
- Related
- ENSP00000481415.1, ENST00000616917.4
- Conserved Domains (2) summary
-
- sd00033
Location:18 → 41
- LRR_RI; leucine-rich repeat [structural motif]
- pfam14580
Location:5 → 98
- LRR_9; Leucine-rich repeat
-
NM_001280559.2 → NP_001267488.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform 4
See identical proteins and their annotated locations for NP_001267488.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) has an alternate splice site in the 3' coding region compared to variant 1. The resulting isoform (4) lacks an internal aa compared to isoform 1.
- Source sequence(s)
-
AC242988
- UniProtKB/Swiss-Prot
-
Q9BTT0
- Conserved Domains (2) summary
-
- sd00033
Location:44 → 65
- LRR_RI; leucine-rich repeat [structural motif]
- pfam14580
Location:34 → 146
- LRR_9; Leucine-rich repeat
-
NM_001280560.2 → NP_001267489.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks two internal exons compared to variant 1. The resulting isoform (5) is shorter and has a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC242988
- Consensus CDS
-
CCDS60245.1
- UniProtKB/TrEMBL
- B4E0D5, E9PLC4
- Related
- ENSP00000435215.1, ENST00000533654.5
- Conserved Domains (2) summary
-
- sd00033
Location:44 → 65
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:65 → 107
- LRR_4; Leucine Rich repeats (2 copies)
-
NM_030920.5 → NP_112182.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform 1
See identical proteins and their annotated locations for NP_112182.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC242988
- Consensus CDS
-
CCDS946.1
- UniProtKB/Swiss-Prot
- B4E0I6, E9PEA6, Q5TB18, Q5TB20, Q8N1S4, Q8WWW9, Q9BTT0
- Related
- ENSP00000463154.1, ENST00000583931.6
- Conserved Domains (2) summary
-
- sd00033
Location:44 → 65
- LRR_RI; leucine-rich repeat [structural motif]
- pfam14580
Location:34 → 146
- LRR_9; Leucine-rich repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
150218417..150236112 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005245514.5 → XP_005245571.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X3
See identical proteins and their annotated locations for XP_005245571.1
- Conserved Domains (4) summary
-
- cd00116
Location:15 → 146
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:44 → 65
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:88 → 130
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:65 → 125
- LRR_8; Leucine rich repeat
-
XM_017002418.3 → XP_016857907.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X2
-
XM_005245513.5 → XP_005245570.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X1
- Conserved Domains (3) summary
-
- cd09293
Location:53 → 126
- AMN1; Antagonist of mitotic exit network protein 1
- sd00033
Location:44 → 65
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:65 → 125
- LRR_8; Leucine rich repeat
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
149343213..149361083 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054338923.1 → XP_054194898.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X3
-
XM_054338921.1 → XP_054194896.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X1
-
XM_054338922.1 → XP_054194897.1 acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X2