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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012210.2 RefSeqGene
- Range
-
5002..71329
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001415871.1 → NP_001402800.1 E3 SUMO-protein ligase RanBP2 isoform 2
Status: REVIEWED
- Source sequence(s)
-
AC010095
-
NM_001415872.1 → NP_001402801.1 E3 SUMO-protein ligase RanBP2 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC010095
-
NM_001415873.1 → NP_001402802.1 E3 SUMO-protein ligase RanBP2 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC010095
-
NM_006267.5 → NP_006258.3 E3 SUMO-protein ligase RanBP2 isoform 1
See identical proteins and their annotated locations for NP_006258.3
Status: REVIEWED
- Source sequence(s)
-
AC010095
- Consensus CDS
-
CCDS2079.1
- UniProtKB/Swiss-Prot
- P49792, Q13074, Q15280, Q53TE2, Q59FH7
- Related
- ENSP00000283195.6, ENST00000283195.11
- Conserved Domains (12) summary
-
- smart00028
Location:60 → 92
- TPR; Tetratricopeptide repeats
- COG5171
Location:1951 → 2143
- YRB1; Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion]
- cd01926
Location:3064 → 3222
- cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
- cd13177
Location:2027 → 2143
- RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
- cd13178
Location:2925 → 3041
- RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
- cd14684
Location:1186 → 1302
- RanBD1_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 1
- cd14685
Location:2324 → 2440
- RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
- sd00025
Location:1419 → 1438
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- sd00006
Location:59 → 89
- TPR; TPR repeat [structural motif]
- pfam00641
Location:1781 → 1809
- zf-RanBP; Zn-finger in Ran binding protein and others
- pfam12185
Location:2709 → 2768
- IR1-M; Nup358/RanBP2 E3 ligase domain
- pfam13414
Location:59 → 126
- TPR_11; TPR repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
108719482..109842301
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047445367.1 → XP_047301323.1 E3 SUMO-protein ligase RanBP2 isoform X4
-
XM_005264002.4 → XP_005264059.1 E3 SUMO-protein ligase RanBP2 isoform X1
- Conserved Domains (10) summary
-
- smart00547
Location:1608 → 1632
- ZnF_RBZ; Zinc finger domain
- COG0457
Location:30 → 126
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- cd01926
Location:3098 → 3256
- cyclophilin_ABH_like; Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding ...
- cd13177
Location:2027 → 2143
- RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
- cd13178
Location:2959 → 3075
- RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
- cd14684
Location:1186 → 1302
- RanBD1_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 1
- cd14685
Location:2324 → 2440
- RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
- TIGR02917
Location:30 → 291
- PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
- sd00025
Location:1419 → 1438
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- sd00006
Location:59 → 89
- TPR; TPR repeat [structural motif]
-
XM_011511576.4 → XP_011509878.1 E3 SUMO-protein ligase RanBP2 isoform X3
- Conserved Domains (12) summary
-
- smart00028
Location:60 → 92
- TPR; Tetratricopeptide repeats
- COG5171
Location:1892 → 2084
- YRB1; Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion]
- cd01926
Location:3039 → 3197
- cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
- cd13177
Location:1968 → 2084
- RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
- cd13178
Location:2900 → 3016
- RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
- cd14684
Location:1186 → 1302
- RanBD1_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 1
- cd14685
Location:2265 → 2381
- RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
- sd00025
Location:1419 → 1438
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- sd00006
Location:59 → 89
- TPR; TPR repeat [structural motif]
- pfam00641
Location:1722 → 1750
- zf-RanBP; Zn-finger in Ran binding protein and others
- pfam12185
Location:2676 → 2732
- IR1-M; Nup358/RanBP2 E3 ligase domain
- pfam13414
Location:59 → 126
- TPR_11; TPR repeat
-
XM_005264007.4 → XP_005264064.1 E3 SUMO-protein ligase RanBP2 isoform X5
- Conserved Domains (9) summary
-
- smart00028
Location:60 → 92
- TPR; Tetratricopeptide repeats
- COG5171
Location:975 → 1167
- YRB1; Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion]
- cd01926
Location:2122 → 2280
- cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
- cd13177
Location:1051 → 1167
- RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
- cd13178
Location:1983 → 2099
- RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
- cd14685
Location:1348 → 1464
- RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
- sd00006
Location:59 → 89
- TPR; TPR repeat [structural motif]
- pfam12185
Location:1759 → 1815
- IR1-M; Nup358/RanBP2 E3 ligase domain
- pfam13414
Location:59 → 126
- TPR_11; TPR repeat
-
XM_011511575.3 → XP_011509877.1 E3 SUMO-protein ligase RanBP2 isoform X2
- Conserved Domains (12) summary
-
- smart00028
Location:59 → 91
- TPR; Tetratricopeptide repeats
- COG5171
Location:1950 → 2142
- YRB1; Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion]
- cd01926
Location:3097 → 3255
- cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
- cd13177
Location:2026 → 2142
- RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
- cd13178
Location:2958 → 3074
- RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
- cd14684
Location:1185 → 1301
- RanBD1_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 1
- cd14685
Location:2323 → 2439
- RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
- sd00025
Location:1418 → 1437
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- sd00006
Location:58 → 88
- TPR; TPR repeat [structural motif]
- pfam00641
Location:1780 → 1808
- zf-RanBP; Zn-finger in Ran binding protein and others
- pfam12185
Location:2734 → 2790
- IR1-M; Nup358/RanBP2 E3 ligase domain
- pfam13414
Location:58 → 125
- TPR_11; TPR repeat
-
XM_011511578.3 → XP_011509880.1 E3 SUMO-protein ligase RanBP2 isoform X6
- Conserved Domains (9) summary
-
- smart00028
Location:59 → 91
- TPR; Tetratricopeptide repeats
- COG5171
Location:974 → 1166
- YRB1; Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion]
- cd01926
Location:2121 → 2279
- cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...
- cd13177
Location:1050 → 1166
- RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
- cd13178
Location:1982 → 2098
- RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
- cd14685
Location:1347 → 1463
- RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
- sd00006
Location:58 → 88
- TPR; TPR repeat [structural motif]
- pfam12185
Location:1758 → 1814
- IR1-M; Nup358/RanBP2 E3 ligase domain
- pfam13414
Location:58 → 125
- TPR_11; TPR repeat
-
XM_017004624.3 → XP_016860113.1 E3 SUMO-protein ligase RanBP2 isoform X7
-
XM_017004625.2 → XP_016860114.1 E3 SUMO-protein ligase RanBP2 isoform X8
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
109180084..110303989
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054343261.1 → XP_054199236.1 E3 SUMO-protein ligase RanBP2 isoform X4
-
XM_054343258.1 → XP_054199233.1 E3 SUMO-protein ligase RanBP2 isoform X1
-
XM_054343260.1 → XP_054199235.1 E3 SUMO-protein ligase RanBP2 isoform X3
-
XM_054343262.1 → XP_054199237.1 E3 SUMO-protein ligase RanBP2 isoform X5
-
XM_054343259.1 → XP_054199234.1 E3 SUMO-protein ligase RanBP2 isoform X2
-
XM_054343263.1 → XP_054199238.1 E3 SUMO-protein ligase RanBP2 isoform X6
-
XM_054343264.1 → XP_054199239.1 E3 SUMO-protein ligase RanBP2 isoform X7
-
XM_054343265.1 → XP_054199240.1 E3 SUMO-protein ligase RanBP2 isoform X8