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Su(Tpl) Suppressor of Triplolethal [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40171, updated on 2-Nov-2024

Summary

Official Symbol
Su(Tpl)provided by FlyBase
Official Full Name
Suppressor of Triplolethalprovided by FlyBase
Primary source
FLYBASE:FBgn0014037
Locus tag
Dmel_CG32217
See related
AllianceGenome:FB:FBgn0014037
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
0854/01; CG32217; CG8037; CR32216; dEll; dELL; Dmel\CG32217; Ell; ELL; l (3)76BD; l(3)76BDs; l(3)S000606; l(3)S085401; SR3-4A; SS3-4; Su(Tpl)/; SY3-1
Summary
Enables RNA polymerase binding activity and chromatin binding activity. Involved in several processes, including neuronal stem cell population maintenance; positive regulation of transcription elongation by RNA polymerase II; and snRNA transcription by RNA polymerase II. Located in euchromatin; nucleolus; and polytene chromosome puff. Part of transcription elongation factor complex. Is expressed in adult brain cell body rind; adult optic lobe; and type II neuroblast. Orthologous to several human genes including ELL (elongation factor for RNA polymerase II) and ELL2 (elongation factor for RNA polymerase II 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See Su(Tpl) in Genome Data Viewer
Location:
76D3-76D4; 3-46 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (19889120..19909410, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (19882220..19902510, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Rab8 Neighboring gene Ubiquitin specific protease 32 Neighboring gene Mi-2 Neighboring gene long non-coding RNA:CR32218 Neighboring gene antisense RNA:CR43889 Neighboring gene Precursor RNA processing 3 Neighboring gene Mtr3 Neighboring gene Regulatory particle non-ATPase 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA polymerase binding IDA
Inferred from Direct Assay
more info
PubMed 
enables chromatin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in chromatin IDA
Inferred from Direct Assay
more info
PubMed 
located_in euchromatin IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus HDA PubMed 
located_in polytene chromosome puff IDA
Inferred from Direct Assay
more info
PubMed 
part_of transcription elongation factor complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of transcription elongation factor complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
suppressor of triplolethal
Names
CG32217-PA
CG32217-PB
CG32217-PC
Su(Tpl)-PA
Su(Tpl)-PB
Su(Tpl)-PC
eleven-nineteen lysine-rich leukemia
elongation factor RNA polymerase II
suppressor of GMR-sina 3-4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    19889120..19909410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001170006.2NP_001163477.1  suppressor of triplolethal, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163477.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q95VE6, Q9VW51
    UniProtKB/TrEMBL
    Q2XY14
    Conserved Domains (2) summary
    pfam07303
    Location:836935
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:16460
    ELL; RNA polymerase II elongation factor ELL
  2. NM_001300193.1NP_001287122.1  suppressor of triplolethal, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287122.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q95VE6, Q9VW51
    UniProtKB/TrEMBL
    Q2XY14
    Conserved Domains (2) summary
    pfam07303
    Location:836935
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:16460
    ELL; RNA polymerase II elongation factor ELL
  3. NM_140898.5NP_649155.3  suppressor of triplolethal, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649155.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q95VE6, Q9VW51
    UniProtKB/TrEMBL
    Q2XY14
    Related
    FBpp0074689
    Conserved Domains (2) summary
    pfam07303
    Location:836935
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:16460
    ELL; RNA polymerase II elongation factor ELL