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CD109 CD109 molecule [ Phyllostomus discolor (pale spear-nosed bat) ]

Gene ID: 114495555, updated on 30-Mar-2024

Summary

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Gene symbol
CD109
Gene description
CD109 molecule
See related
EnsemblRapid:ENSPDIG00005001418
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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See CD109 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
34
Annotation release Status Assembly Chr Location
101 current mPhyDis1.pri.v3 (GCF_004126475.2) 4 NC_040906.2 (138880882..139004171)
100 previous assembly mPhyDis1_v1.p (GCF_004126475.1) 4 NC_040906.1 (134185769..134303934)

Chromosome 4 - NC_040906.2Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 alpha 1 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like Neighboring gene solute carrier family 17 member 5 Neighboring gene rRNA N6-adenosine-methyltransferase METTL5-like Neighboring gene uncharacterized protein C1orf146 homolog Neighboring gene collagen type XII alpha 1 chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD109 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus discolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhyDis1.pri.v3

Genomic

  1. NC_040906.2 Reference mPhyDis1.pri.v3

    Range
    138880882..139004171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028510864.2 → XP_028366665.1  CD109 antigen

    UniProtKB/TrEMBL
    A0A6J2LLJ7, A0A834E9X5
    Related
    ENSPDIP00005001962.1, ENSPDIT00005002326.2
    Conserved Domains (4) summary
    COG2373
    Location:123 → 1173
    YfaS; Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only]
    cd02897
    Location:907 → 1194
    A2M_2; Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester ...
    pfam00207
    Location:693 → 784
    A2M; Alpha-2-macroglobulin family
    pfam07677
    Location:1311 → 1395
    A2M_recep; A-macroglobulin receptor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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