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CD109 CD109 molecule [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102111807, updated on 3-Aug-2024

Summary

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Gene symbol
CD109
Gene description
CD109 molecule
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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See CD109 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087557.1 (7059046..7128943)

NW_005087557.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 alpha 1 Neighboring gene solute carrier family 17 member 5 Neighboring gene collagen type XII alpha 1 chain Neighboring gene cytochrome c oxidase subunit 7A2, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087557.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD109 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087557.1 Reference PseHum1.0 Primary Assembly

    Range
    7059046..7128943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005518144.2 → XP_005518201.1  CD109 antigen

    Conserved Domains (7) summary
    COG2373
    Location:48 → 996
    YfaS; Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only]
    cd02897
    Location:903 → 1190
    A2M_2; Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester ...
    pfam00207
    Location:689 → 780
    A2M; Alpha-2-macroglobulin family
    pfam01835
    Location:125 → 216
    A2M_N; MG2 domain
    pfam07677
    Location:1308 → 1392
    A2M_recep; A-macroglobulin receptor
    pfam07678
    Location:955 → 1192
    A2M_comp; A-macroglobulin complement component
    pfam07703
    Location:468 → 593
    A2M_N_2; Alpha-2-macroglobulin family N-terminal region
Nucleotide Protein
Heading Accession and Version

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