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Ankrd16 ankyrin repeat domain 16 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100765375, updated on 8-Mar-2024

Summary

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Gene symbol
Ankrd16
Gene description
ankyrin repeat domain 16
See related
Ensembl:ENSCGRG00015015915
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Ankrd16 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613580.1 (3611760..3623010)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (228548563..228559813)

NW_003613580.1Genomic Context describing neighboring genes Neighboring gene interleukin 15 receptor subunit alpha Neighboring gene F-box DNA helicase 1 Neighboring gene GDP dissociation inhibitor 2 Neighboring gene transcription activation suppressor family member 2 Neighboring gene ankyrin repeat and SOCS box containing 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 16
Names
Ankyrin repeat domain-containing protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613580.1 Reference CriGri_1.0 Primary Assembly

    Range
    3611760..3623010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003494941.4 → XP_003494989.1  ankyrin repeat domain-containing protein 16 isoform X4

    See identical proteins and their annotated locations for XP_003494989.1

    UniProtKB/TrEMBL
    A0A9J7FLN7
    Conserved Domains (3) summary
    cd00204
    Location:46 → 166
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:51 → 143
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:83 → 110
    ANK; ANK repeat [structural motif]

  2. XM_007649783.4 → XP_007647973.1  ankyrin repeat domain-containing protein 16 isoform X1

    UniProtKB/TrEMBL
    A0A8C2N2Y3, A0A9J7FMV1
    Conserved Domains (3) summary
    cd00204
    Location:46 → 166
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:51 → 143
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:83 → 110
    ANK; ANK repeat [structural motif]

  3. XM_003494940.5 → XP_003494988.1  ankyrin repeat domain-containing protein 16 isoform X2

    See identical proteins and their annotated locations for XP_003494988.1

    UniProtKB/TrEMBL
    A0A8C2N2Y3, G3GR72
    Conserved Domains (3) summary
    cd00204
    Location:46 → 166
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:83 → 110
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:180 → 234
    Ank_4; Ankyrin repeats (many copies)

  4. XM_027441404.2 → XP_027297205.1  ankyrin repeat domain-containing protein 16 isoform X3

    UniProtKB/TrEMBL
    A0A9J7FLW8

RNA

  1. XR_483513.4 RNA Sequence

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    228548563..228559813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027405118.2 → XP_027260919.1  ankyrin repeat domain-containing protein 16 isoform X4

    UniProtKB/TrEMBL
    A0A9J7FLN7

  2. XM_027405115.2 → XP_027260916.1  ankyrin repeat domain-containing protein 16 isoform X1

    UniProtKB/TrEMBL
    A0A8C2N2Y3, A0A9J7FMV1
    Related
    ENSCGRP00015020831.1, ENSCGRT00015025616.2

  3. XM_027405116.2 → XP_027260917.1  ankyrin repeat domain-containing protein 16 isoform X2

    UniProtKB/TrEMBL
    A0A8C2N2Y3, G3GR72
    Related
    ENSCGRP00015020839.1, ENSCGRT00015025627.2

  4. XM_027405117.2 → XP_027260918.1  ankyrin repeat domain-containing protein 16 isoform X3

    UniProtKB/TrEMBL
    A0A9J7FLW8

RNA

  1. XR_003483284.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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