txid9913[orgn] AND "isolate E"[All Fields] - GEO DataSets - NCBI

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Select item 2000150251.

E. coli infection induces distinct local and systemic transcriptome responses in the mammary gland

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Bos taurus

Type:: Expression profiling by array

Platform:: GPL2112
30 Samples

Download data: CEL

Series

Accession:: GSE15025

ID:: 200015025

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000150222.

Transcriptome analysis of bovine mammary gland tissue of an udder quarter adjacent to an E.coli treated one for 24 hrs

(Submitter supplied) By comparison of the transcriptome profiles of udder quarters neighboring to infected quarters and healthy udder tissue we analyse gene expression in the late stage of infection with E. coli 1303. Differentially expressed genes and transcription factors regulating coexpressed genes identified by SOTA clustering were used to identify key genes that define systemic reactions to infection with E. coli 1303. more...

Organism:: Bos taurus

Type:: Expression profiling by array

Platform:: GPL2112
10 Samples

Download data: CEL

Series

Accession:: GSE15022

ID:: 200015022

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000150203.

Transcriptome analysis of bovine mammary gland tissue treated with E. coli for 24 hours

(Submitter supplied) By comparison of the transcriptome profiles of infected and healthy udder tissue we analyse gene expression in the late stage of infection with E. coli 1303. Differentially expressed genes and transcription factors regulating coexpressed genes identified by SOTA clustering were used to identify key genes that define late stage of infection with E. coli 1303.

Organism:: Bos taurus

Type:: Expression profiling by array

Platform:: GPL2112
10 Samples

Download data: CEL

Series

Accession:: GSE15020

ID:: 200015020

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000150194.

Transcriptome analysis of bovine mammary gland tissue treated with E. coli for 6 hours

(Submitter supplied) By comparison of the transcriptome profiles of infected and healthy udder tissue we analyse gene expression in the early stage of infection with E. coli 1303. Differentially expressed genes and transcription factors regulating coexpressed genes identified by SOTA clustering were used to identify key genes that define early stage of infection with E. coli 1303. Keywords: disease state analysis

Organism:: Bos taurus

Type:: Expression profiling by array

Platform:: GPL2112
10 Samples

Download data: CEL

Series

Accession:: GSE15019

ID:: 200015019

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 3003755885.

udder_healthy_24h_rep5_2

Organism:: Bos taurus

Source name:: mammary gland tissue, udder quarter neighboring to one treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15022 GSE15025

Download data: CEL

Sample

Accession:: GSM375588

ID:: 300375588

Select item 3003755876.

udder_healthy_24h_rep4_2

Organism:: Bos taurus

Source name:: mammary gland tissue, udder quarter neighboring to one treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15022 GSE15025

Download data: CEL

Sample

Accession:: GSM375587

ID:: 300375587

Select item 3003755867.

udder_healthy_24h_rep3_2

Organism:: Bos taurus

Source name:: mammary gland tissue, udder quarter neighboring to one treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15022 GSE15025

Download data: CEL

Sample

Accession:: GSM375586

ID:: 300375586

Select item 3003755858.

udder_healthy_24h_rep2_2

Organism:: Bos taurus

Source name:: mammary gland tissue, udder quarter neighboring to one treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15022 GSE15025

Download data: CEL

Sample

Accession:: GSM375585

ID:: 300375585

Select item 3003755849.

udder_healthy_24h_rep1_2

Organism:: Bos taurus

Source name:: mammary gland tissue, udder quarter neighboring to one treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15022 GSE15025

Download data: CEL

Sample

Accession:: GSM375584

ID:: 300375584

Select item 30037558310.

udder_neigboring_24h_rep5

Organism:: Bos taurus

Source name:: mammary gland tissue, udder quarter neighboring to one treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15022 GSE15025

Download data: CEL

Sample

Accession:: GSM375583

ID:: 300375583

Select item 30037558211.

udder_neigboring_24h_rep4

Organism:: Bos taurus

Source name:: mammary gland tissue, udder quarter neighboring to one treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15022 GSE15025

Download data: CEL

Sample

Accession:: GSM375582

ID:: 300375582

Select item 30037558112.

udder_neigboring_24h_rep3

Organism:: Bos taurus

Source name:: mammary gland tissue, udder quarter neighboring to one treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15022 GSE15025

Download data: CEL

Sample

Accession:: GSM375581

ID:: 300375581

Select item 30037558013.

udder_neigboring_24h_rep2

Organism:: Bos taurus

Source name:: mammary gland tissue, udder quarter neighboring to one treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15022 GSE15025

Download data: CEL

Sample

Accession:: GSM375580

ID:: 300375580

Select item 30037557914.

udder_neigboring_24h_rep1

Organism:: Bos taurus

Source name:: mammary gland tissue, udder quarter neighboring to one treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15022 GSE15025

Download data: CEL

Sample

Accession:: GSM375579

ID:: 300375579

Select item 30037557815.

udder_healthy_24h_REP5_1

Organism:: Bos taurus

Source name:: mammary gland tissue, healthy, external control

Platform:: GPL2112
Series:: GSE15020 GSE15025

Download data: CEL

Sample

Accession:: GSM375578

ID:: 300375578

Select item 30037557716.

udder_healthy_24h_REP4_1

Organism:: Bos taurus

Source name:: mammary gland tissue, healthy, external control

Platform:: GPL2112
Series:: GSE15020 GSE15025

Download data: CEL

Sample

Accession:: GSM375577

ID:: 300375577

Select item 30037557617.

udder_healthy_24h_REP3_1

Organism:: Bos taurus

Source name:: mammary gland tissue, healthy, external control

Platform:: GPL2112
Series:: GSE15020 GSE15025

Download data: CEL

Sample

Accession:: GSM375576

ID:: 300375576

Select item 30037557518.

udder_healthy_24h_REP2_1

Organism:: Bos taurus

Source name:: mammary gland tissue, healthy, external control

Platform:: GPL2112
Series:: GSE15020 GSE15025

Download data: CEL

Sample

Accession:: GSM375575

ID:: 300375575

Select item 30037557419.

udder_healthy_24h_REP1_1

Organism:: Bos taurus

Source name:: mammary gland tissue, healthy, external control

Platform:: GPL2112
Series:: GSE15020 GSE15025

Download data: CEL

Sample

Accession:: GSM375574

ID:: 300375574

Select item 30037557320.

udder_infected_24h_rep5

Organism:: Bos taurus

Source name:: mammary gland tissue, treated with E. coli 1303, 24h

Platform:: GPL2112
Series:: GSE15020 GSE15025

Download data: CEL

Sample

Accession:: GSM375573

ID:: 300375573

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