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Items: 1 to 20 of 24

1.

RNA-Seq analysis for the antibiotics resistance between two Streptococcus anginosus strains

(Submitter supplied) We performed transcriptome sequencing to profile gene expressions upon the treatment of vancomycin in two Streptococcus anginosus strains.
Organism:
Streptococcus anginosus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL29524
8 Samples
Download data: TXT
Series
Accession:
GSE163717
ID:
200163717

PubMed Similar studies SRA Run Selector

2.

A Phage-Like Chromosomal Island Impacts Global Transcription Patterns and Virulence in Streptococcus anginosus

(Submitter supplied) Streptococcus anginosus is an important cause of brain and liver abscesses, meningitis, appendicitis, female genital tract infection, neonatal sepsis, and bacteremia. Recent studies show that S. anginosus is responsible for around 30% of streptococci associated purulent infections of internal organs. Genome sequencing of S. anginosus identified a phage-like chromosomal island (SanCI) integrated into the DNA mismatch repair operon. more...
Organism:
Streptococcus anginosus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL25970
8 Samples
Download data: XLSX
Series
Accession:
GSE124234
ID:
200124234

SRA Run Selector

3.

Identification of Gram-positive bacteria using BC-GP assay

(Submitter supplied) Signal intensities of BC-GP array for 105 speimens The Verigene Gram-Positive Blood Culture (BC-GP) nucleic acid assay is an automated microarray-based test, which can detect 12 Gram-positive bacterial genes and 3 resistance determinants using blood culture broths. We investigated signal intensities of microarray spots, and reclassified undetermined results where the automated system failed and various errors were called in blood culture specimens and spiked samples.
Organism:
Leuconostoc lactis; Staphylococcus epidermidis; Staphylococcus haemolyticus; Streptococcus gordonii; Streptococcus thermophilus; Streptococcus pneumoniae; Corynebacterium striatum; Streptococcus constellatus; Escherichia coli; Klebsiella pneumoniae; Micrococcus; Micrococcus luteus; Staphylococcus aureus; Streptococcus salivarius; Streptococcus agalactiae; Streptococcus dysgalactiae; Enterococcus faecalis; Staphylococcus capitis; Streptococcus anginosus group; Staphylococcus; Streptococcus parasanguinis; Enterococcus gallinarum; Streptococcus mitis; Corynebacterium afermentans; Streptococcus australis; Streptococcus gallolyticus; Staphylococcus simulans; Staphylococcus hominis; Streptococcus; Streptococcus pyogenes; Streptococcus anginosus; Enterococcus faecium; Bacillus licheniformis; Listeria; Listeria monocytogenes; Staphylococcus lugdunensis; Staphylococcus caprae; Staphylococcus saprophyticus
Type:
Other
Platform:
GPL18634
104 Samples
Download data: TXT
Series
Accession:
GSE57245
ID:
200057245

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4.

Illumina HiSeq 3000 (Streptococcus anginosus)

Organism:
Streptococcus anginosus
1 Series
8 Samples
Download data
Platform
Accession:
GPL29524
ID:
100029524

5.

Illumina MiSeq (Streptococcus anginosus)

Organism:
Streptococcus anginosus
1 Series
8 Samples
Download data
Platform
Accession:
GPL25970
ID:
100025970

6.

KHUD_S3.VAN.R2

Organism:
Streptococcus anginosus
Source name:
RNA-Seq of S. anginosus KHUD_S3 treated with vancomycin rep2
Platform:
GPL29524
Series:
GSE163717
Download data: TXT
Sample
Accession:
GSM4984354
ID:
304984354

SRA Run Selector

7.

KHUD_S3.VAN.R1

Organism:
Streptococcus anginosus
Source name:
RNA-Seq of S. anginosus KHUD_S3 treated with vancomycin rep1
Platform:
GPL29524
Series:
GSE163717
Download data: TXT
Sample
Accession:
GSM4984353
ID:
304984353

SRA Run Selector

8.

KHUD_S3.CON.R2

Organism:
Streptococcus anginosus
Source name:
RNA-Seq of S. anginosus KHUD_S3 control rep2
Platform:
GPL29524
Series:
GSE163717
Download data: TXT
Sample
Accession:
GSM4984352
ID:
304984352

SRA Run Selector

9.

KHUD_S3.CON.R1

Organism:
Streptococcus anginosus
Source name:
RNA-Seq of S. anginosus KHUD_S3 control rep1
Platform:
GPL29524
Series:
GSE163717
Download data: TXT
Sample
Accession:
GSM4984351
ID:
304984351

SRA Run Selector

10.

KHUD_S1.VAN.R2

Organism:
Streptococcus anginosus
Source name:
RNA-Seq of S. anginosus KHUD_S1 treated with vancomycin rep2
Platform:
GPL29524
Series:
GSE163717
Download data: TXT
Sample
Accession:
GSM4984350
ID:
304984350

SRA Run Selector

11.

KHUD_S1.VAN.R1

Organism:
Streptococcus anginosus
Source name:
RNA-Seq of S. anginosus KHUD_S1 treated with vancomycin rep1
Platform:
GPL29524
Series:
GSE163717
Download data: TXT
Sample
Accession:
GSM4984349
ID:
304984349

SRA Run Selector

12.

KHUD_S1.CON.R2

Organism:
Streptococcus anginosus
Source name:
RNA-Seq of S. anginosus KHUD_S1 control rep2
Platform:
GPL29524
Series:
GSE163717
Download data: TXT
Sample
Accession:
GSM4984348
ID:
304984348

SRA Run Selector

13.

KHUD_S1.CON.R1

Organism:
Streptococcus anginosus
Source name:
RNA-Seq of S. anginosus KHUD_S1 control rep1
Platform:
GPL29524
Series:
GSE163717
Download data: TXT
Sample
Accession:
GSM4984347
ID:
304984347

SRA Run Selector

14.

J4211-SanCI-LL

Organism:
Streptococcus anginosus
Source name:
J4211(SanCI) LL
Platform:
GPL25970
Series:
GSE124234
Download data
Sample
Accession:
GSM3526274
ID:
303526274

SRA Run Selector

15.

J4211-SanCI-EL

Organism:
Streptococcus anginosus
Source name:
J4211(SanCI) EL
Platform:
GPL25970
Series:
GSE124234
Download data
Sample
Accession:
GSM3526273
ID:
303526273

SRA Run Selector

16.

J4211-SanCI-Erm-LL

Organism:
Streptococcus anginosus
Source name:
J4211(SanCI ∆strA::ermB) LL
Platform:
GPL25970
Series:
GSE124234
Download data
Sample
Accession:
GSM3526272
ID:
303526272

SRA Run Selector

17.

J4211-SanCI-Erm-EL

Organism:
Streptococcus anginosus
Source name:
J4211(SanCI ∆strA::ermB) EL
Platform:
GPL25970
Series:
GSE124234
Download data
Sample
Accession:
GSM3526271
ID:
303526271

SRA Run Selector

18.

J4211LL (Set two)

Organism:
Streptococcus anginosus
Source name:
WT used for comparison to SanCI-LL
Platform:
GPL25970
Series:
GSE124234
Download data
Sample
Accession:
GSM3526270
ID:
303526270

SRA Run Selector

19.

J4211EL (Set two)

Organism:
Streptococcus anginosus
Source name:
WT used for comparison to SanCI-EL
Platform:
GPL25970
Series:
GSE124234
Download data
Sample
Accession:
GSM3526269
ID:
303526269

SRA Run Selector

20.

J4211-LL (Set one)

Organism:
Streptococcus anginosus
Source name:
WT used for comparison to SanCI-Erm-LL
Platform:
GPL25970
Series:
GSE124234
Download data
Sample
Accession:
GSM3526268
ID:
303526268

SRA Run Selector

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