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Series GSE124234 Query DataSets for GSE124234
Status Public on Dec 21, 2018
Title A Phage-Like Chromosomal Island Impacts Global Transcription Patterns and Virulence in Streptococcus anginosus
Organism Streptococcus anginosus
Experiment type Expression profiling by high throughput sequencing
Summary Streptococcus anginosus is an important cause of brain and liver abscesses, meningitis, appendicitis, female genital tract infection, neonatal sepsis, and bacteremia. Recent studies show that S. anginosus is responsible for around 30% of streptococci associated purulent infections of internal organs. Genome sequencing of S. anginosus identified a phage-like chromosomal island (SanCI) integrated into the DNA mismatch repair operon. In S. pyogenes, related chromosomal islands (SpyCI) integrated into the same operon confer a mutator phenotype as well as alter global gene regulation, including the increased expression of many virulence factors. We hypothesized that SanCI will also alter global transcription patterns and virulence in S. anginosus. The SanCI from strain F0211 was introduced into a SanCI-free S. anginosus strain (J4211) by natural transformation. To provide a selectable marker for transformation, gene strA, encoding a predicted transcriptional regulator, was replaced in F0211 with the gene conferring erythromycin resistance (ermB), which after transfer created strain OKSan3. A functional copy of strA was then returned to this derivative of J4211, creating strain OKSan4. RNA sequencing (RNA-seq) of strains J4211, OKSan4 and OKSan3 confirmed that the addition of the SanCI altered S. anginosus global transcription patterns with increased expression of virulence, stress response and competence factors in a growth phase dependent manner. Virulence studies using Galleria mellonella as an acute infection model showed significantly increased inflammation and mortality in larvae challenged with strains OKSan4 and OKSan3 as compare to SanCI-free strain J4211. qRT-PCR analysis supported these results, revealing that antimicrobial factors of G. mellonella were more highly expressed after infection with OKSan4 compare to J4211 infection. Further, RNA-seq suggested that SanCI-encoded gene strA may encode one of the factors responsible for altered global transcriptional changes. The result of this study along with our previous studies in S. pyogenes demonstrate that streptococcal chromosomal islands are a unique class of virulence factors that improve the fitness of their host cell by altering global transcription patterns and increasing virulence.
 
Overall design Comparison of three strains differing by the presence of a phage-like chromosomal island or the phage-like chromosomal lacking gene strA at early log or late log growth at 37°C.
 
Contributor(s) McShan WM
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Submission date Dec 20, 2018
Last update date Dec 21, 2018
Contact name William Michael McShan
E-mail(s) william-mcshan@ouhsc.edu
Phone 405-271-6593
Organization name University of Oklahoma Health Sciences Center
Department Pharmaceutical Sciences
Street address 1110 N. Stonewall Ave.
City Oklahoma City
State/province OK
ZIP/Postal code 73117
Country USA
 
Platforms (1)
GPL25970 Illumina MiSeq (Streptococcus anginosus)
Samples (8)
GSM3526267 J4211-EL (Set one)
GSM3526268 J4211-LL (Set one)
GSM3526269 J4211EL (Set two)
Relations
BioProject PRJNA511027
SRA SRP174131

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124234_1936_genes.xlsx 578.5 Kb (ftp)(http) XLSX
GSE124234_processed_data_7-12-16.xlsx 143.4 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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