GEO DataSet Links for PMC (Select 6386582) - GEO DataSets

Select item 2001247501.

Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [ChIP-seq]

(Submitter supplied) The RNA-directed DNA methylation (RdDM) pathway in plants controls gene expression via cytosine DNA methylation. The ability to manipulate RdDM would shed light on the mechanisms and applications of DNA methylation to control gene expression. Here, we identified diverse RdDM proteins that are capable of targeting methylation and silencing in Arabidopsis when tethered to an artificial zinc finger (ZF-RdDM). more...

Organism:: Arabidopsis thaliana

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL21785
56 Samples

Download data: BW

Series

Accession:: GSE124750

ID:: 200124750

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001247492.

Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [small RNA-seq]

(Submitter supplied) The RNA-directed DNA methylation (RdDM) pathway in plants controls gene expression via cytosine DNA methylation. The ability to manipulate RdDM would shed light on the mechanisms and applications of DNA methylation to control gene expression. Here, we identified diverse RdDM proteins that are capable of targeting methylation and silencing in Arabidopsis when tethered to an artificial zinc finger (ZF-RdDM). more...

Organism:: Arabidopsis thaliana

Type:: Non-coding RNA profiling by high throughput sequencing

Platforms:: GPL13222 GPL17639
39 Samples

Download data: BW

Series

Accession:: GSE124749

ID:: 200124749

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001247473.

Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]

(Submitter supplied) The RNA-directed DNA methylation (RdDM) pathway in plants controls gene expression via cytosine DNA methylation. The ability to manipulate RdDM would shed light on the mechanisms and applications of DNA methylation to control gene expression. Here, we identified diverse RdDM proteins that are capable of targeting methylation and silencing in Arabidopsis when tethered to an artificial zinc finger (ZF-RdDM). more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing

Platform:: GPL21785
40 Samples

Download data: TXT

Series

Accession:: GSE124747

ID:: 200124747

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001247464.

Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [WGBS]

(Submitter supplied) The RNA-directed DNA methylation (RdDM) pathway in plants controls gene expression via cytosine DNA methylation. The ability to manipulate RdDM would shed light on the mechanisms and applications of DNA methylation to control gene expression. Here, we identified diverse RdDM proteins that are capable of targeting methylation and silencing in Arabidopsis when tethered to an artificial zinc finger (ZF-RdDM). more...

Organism:: Arabidopsis thaliana

Type:: Methylation profiling by high throughput sequencing

Platforms:: GPL21785 GPL13222
45 Samples

Download data: BW

Series

Accession:: GSE124746

ID:: 200124746

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001247445.

Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [BS-PCR-seq]

(Submitter supplied) The RNA-directed DNA methylation (RdDM) pathway in plants controls gene expression via cytosine DNA methylation. The ability to manipulate RdDM would shed light on the mechanisms and applications of DNA methylation to control gene expression. Here, we identified diverse RdDM proteins that are capable of targeting methylation and silencing in Arabidopsis when tethered to an artificial zinc finger (ZF-RdDM). more...

Organism:: Arabidopsis thaliana

Type:: Methylation profiling by high throughput sequencing

Platforms:: GPL13222 GPL17639
66 Samples

Download data: TXT

Series

Accession:: GSE124744

ID:: 200124744

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001245466.

Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis

(Submitter supplied) The RNA-directed DNA methylation (RdDM) pathway in plants controls gene expression via cytosine DNA methylation. The ability to manipulate RdDM would shed light on the mechanisms and applications of DNA methylation to control gene expression. Here, we identified diverse RdDM proteins that are capable of targeting methylation and silencing in Arabidopsis when tethered to an artificial zinc finger (ZF-RdDM). more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing

Platforms:: GPL21785 GPL13222 GPL17639
246 Samples

Download data: BW, TXT

Series

Accession:: GSE124546

ID:: 200124546

PubMed Full text in PMC Similar studies

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