Similar studies for GEO DataSets (Select 401) - GEO DataSets

Links from GEO DataSets

Items: 20

Select item 4011.

Analysis of C57BL/6 testis from day 1 to adult. Determination of transcripts expressed specifically by male germ cells late in spermatogenesis (postmeiotic) reveals many candidates for contraceptive targeting and fertilization participants.

Organism:: Mus musculus

Type:: Expression profiling by array, count, 11 age, 3 tissue sets

Platform:: GPL81
Series:: GSE640
17 Samples

Download data: CEL

DataSet

Accession:: GDS401

ID:: 401

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 2000006402.

Spermatogenesis

(Submitter supplied) A multitude of genes expressed solely in meiotic or postmeiotic spermatogenic cells offers a myriad of contraceptive targets. Understanding mammalian spermatozoan development and the events surrounding fertilization has grown slowly, in part because of uncertainty about the number and identity of the cellular components involved. Determination of those transcripts expressed specifically by germ cells should provide an inclusive list of probable critical proteins. more...

Organism:: Mus musculus

Type:: Expression profiling by array

Datasets:: GDS401 GDS409 GDS410
Platforms:: GPL82 GPL83 GPL81
51 Samples

Download data: CEL

Series

Accession:: GSE640

ID:: 200000640

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 4103.

Spermatogenesis time course (MG-U74C)

Organism:: Mus musculus

Type:: Expression profiling by array, count, 11 age, 3 tissue sets

Platform:: GPL83
Series:: GSE640
17 Samples

Download data: CEL

DataSet

Accession:: GDS410

ID:: 410

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 4094.

Spermatogenesis time course (MG-U74B)

Organism:: Mus musculus

Type:: Expression profiling by array, count, 11 age, 3 tissue sets

Platform:: GPL82
Series:: GSE640
17 Samples

Download data: CEL

DataSet

Accession:: GDS409

ID:: 409

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 2000544085.

Riding the spermatogenic wave: Profiling gene expression within neonatal germ and Sertoli cells during a synchronized initial wave of spermatogenesis

(Submitter supplied) WIN 18,446/RA treatment of neonatal mice was used to synchronize the initial wave of spermatogenesis and identify novel messages expressed within either germ or Sertoli cells as spermatogonia enter meiosis.

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL6246
77 Samples

Download data: CEL

Series

Accession:: GSE54408

ID:: 200054408

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000483216.

High-Resolution Profiling of Novel Transcribed Regions During Rat Spermatogenesis

(Submitter supplied) Mammalian spermatogenesis is a complex and highly orchestrated combination of processes in which male germline proliferation and differentiation result in the production of mature spermatozoa. If recent genome-wide studies have contributed to the in-depth analysis of the male germline protein-coding transcriptome, little effort has yet been devoted to the systematic identification of novel unannotated transcribed regions expressed during mammalian spermatogenesis. more...

Organism:: Rattus norvegicus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL10287
8 Samples

Download data: BED, GTF, TXT

Series

Accession:: GSE48321

ID:: 200048321

PubMed Similar studies SRA Run Selector

Select item 2000160297.

Expression profiling of rainbow trout testicular development and spermatogenesis

(Submitter supplied) Trout spermatogenesis proceeds seasonally in a way that all morphological and cellular events tend to be synchronized. We thus used gonads at key stages of the male reproductive cycle together with isolated germ cell populations to study the changes in gene expression underlying testis development. Statistical analysis followed by clustering of expression profiles allowed the discrimination of sequential events of gene activation or repression during testis development and/or throughout the germline.

Organism:: Oncorhynchus mykiss

Type:: Expression profiling by array

Platform:: GPL3650
38 Samples

Download data: QTF

Series

Accession:: GSE16029

ID:: 200016029

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000017688.

Round Spermatids and Pachytene Spermatocytes

(Submitter supplied) Mouse Round Spermatids (Sptd) and Pachytene Spermatocytes (Spcy) Keywords: repeat sample

Organism:: Mus musculus

Type:: Expression profiling by array

Platforms:: GPL1451 GPL1452 GPL1450
9 Samples

Download data

Series

Accession:: GSE1768

ID:: 200001768

Select item 2000307739.

Ctnnb1-targeted genes in mouse post-meiotic germ cells

(Submitter supplied) To determine differential gene expression in Ctnnb1 CKO mice testis compared to CTRL mice testis.

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL4134
2 Samples

Download data: TXT

Series

Accession:: GSE30773

ID:: 200030773

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20008326410.

Small RNA and mRNA transcriptome profiling in wildtype mice at multiple stages of spermatogenesis, from whole testis at day 1 postpartum (pp), day 3 pp, and day 7 pp and purified leptotene/zygotene and pachytene spermatocytes.

(Submitter supplied) MicroRNAs are essential for spermatogenesis. However, the stage‑specific requirements for specific miRNAs in the male mammalian germ line remain largely uncharacterized. The miR‑34 family is, to date, the only miRNA proven to be necessary for the production of sperm in mice, though its germline roles are poorly understood. Here, we generate and analyze paired small RNA and mRNA profiles across different stages of germline development in male mice, focusing on time points shortly before and during meiotic prophase I.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing

Platforms:: GPL17021 GPL13112
20 Samples

Download data: TXT

Series

Accession:: GSE83264

ID:: 200083264

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20000471111.

Developmental changes in RNP and Polysome associated mRNAs in Mouse testes

(Submitter supplied) Gametes rely heavily on post-transcriptional control mechanisms to regulate their differentiation. In eggs, the storage and selective temporal activation of maternal mRNAs is essential for normal development. In the male, transcription ceases during spermiogenesis necessitating the post-transcriptional regulation of many paternal mRNAs required for spermatid differentiation and spermatozoan function. more...

Organism:: Mus musculus

Type:: Expression profiling by array

Dataset:: GDS2277
Platform:: GPL339
18 Samples

Download data: CEL

Series

Accession:: GSE4711

ID:: 200004711

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 227712.

Ribonucleoprotein- and polysome-associated mRNAs of the testis: time-course

Analysis of ribonucleoprotein (RNP) and polysome fractions of prepuberal and adult testes. Protein synthesis occurs on polysomes and translationally inactive mRNAs are sequestered as RNPs. Results provide insight into the translation state of individual mRNAs as spermatogenesis proceeds.

Organism:: Mus musculus

Type:: Expression profiling by array, count, 3 age, 2 development stage, 2 other sets

Platform:: GPL339
Series:: GSE4711
18 Samples

Download data: CEL

DataSet

Accession:: GDS2277

ID:: 2277

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 20006722913.

Topaz1, a germ cell specific factor essential for male meiotic progression.

(Submitter supplied) Testicular gene expression changes with loss of Topaz1

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL6887
12 Samples

Download data: TXT

Series

Accession:: GSE67229

ID:: 200067229

Select item 20004185914.

miRNA-mRNA networks in mouse testis during the 1st wave of spermatogenesis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Mus musculus

Type:: Non-coding RNA profiling by array; Expression profiling by array

Platforms:: GPL6246 GPL16219
15 Samples

Download data: CEL, TXT

Series

Accession:: GSE41859

ID:: 200041859

Select item 20004185815.

Microarray profiling of total testicular transcriptome in mouse

(Submitter supplied) Gene expression during spermatogenesis is highly variable and this differential pattern is very important for the successive culmination of different stages of the process, leading to production of the male gamete. Taking the time window of first wave of spermatogenesis, we did a microarray profiling of total testicular transcriptome in mouse and found several significant patterns of variable gene expression, forming upregulated and downregulated clusters among the three stages analyzed here.

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL6246
9 Samples

Download data: CEL

Series

Accession:: GSE41858

ID:: 200041858

Select item 20004185716.

Microarray profiling of total testicular microRNAs in mouse

(Submitter supplied) Gene expression in mammalian testis undergoing spermatogenesis is under strict post transcriptional regulation and microRNAs are known to play a role in this regulation. Considering the time window of first wave of spermatogenesis, we did a microarray profiling of total testicular microRNAs in mouse and found several significant patterns of variable expression of these molecules during the different stages analyzed here.

Organism:: Mus musculus

Type:: Non-coding RNA profiling by array

Platform:: GPL16219
6 Samples

Download data: TXT

Series

Accession:: GSE41857

ID:: 200041857

Select item 20001850217.

Drosophila melanogaster spermatogenesis expression profile: mitotic, meiotic and post-meiotic cells

(Submitter supplied) We conducted a genome-wide expression analysis of wild-type males using three cell populations isolated from mitotic, meiotic and post-meiotic phases of spermatogenesis in Drosophila melanogaster. Our approach was to directly isolate testis regions enriched with RNAs from each of the three specific germline phases. We used microarrays to detail the global gene expression profile in spermatogenesis and identified up- and down-regulated genes between two different spermatogenic phases in pairwise comparisons

Organism:: Drosophila melanogaster

Type:: Expression profiling by array

Platform:: GPL1322
9 Samples

Download data: CEL

Series

Accession:: GSE18502

ID:: 200018502

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20003997018.

Transcriptomic sequencing of the murine testis during the first wave of spermatogenesis

(Submitter supplied) Our experimental design includes samples at different time points during the first wave of spermatogenesis. Each time point corresponds to specific cell content in the testis. First time point is post natal day (PND) 7, when only somatic cells and spermatogonia are present in the testis. Thereafter additional cell types are present in selected samples in chronological order: PND 14 contains early spermatocytes, PND 17 late spermatocytes, PND 21 round spermatids and finally PND 28 elongating spermatids. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL14602
12 Samples

Download data: TAB

Series

Accession:: GSE39970

ID:: 200039970

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20004928319.

Translational activation of developmental mRNAs during neonatal mouse testis development

(Submitter supplied) The sequence of gene regulatory events that drive neonatal germ cell development in the mammalian testis is not yet clear. We assessed changes in mRNA utilization in the neonatal testis at 1 and 4 dpp, times when the testis contains quiescent gonocytes (1 dpp) and proliferating spermatogonia (4 dpp). There are not thought to be major changes in the nature or number of somatic cells over that interval. more...

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL1261
12 Samples

Download data: CEL

Series

Accession:: GSE49283

ID:: 200049283

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20010502420.

Arraystar lncRNA and mRNA microarray data for profiling of testis-specific long noncoding RNA in mice

(Submitter supplied) LncRNA and mRNA expression profiles in five mouse tissues like brain, heart, kidney, liver and testis and three germ cell-related cell lines such as F9, GC-1 and GC-2

Organism:: Mus musculus

Type:: Non-coding RNA profiling by array

Platform:: GPL24126
24 Samples

Download data: TXT

Series

Accession:: GSE105024

ID:: 200105024

PubMed Full text in PMC Similar studies Analyze with GEO2R

GEO DataSets

Functional Genomics Studies

Result Filters

Entry type

Organism

Study type

Author

Attribute name

Publication dates

Custom date range

Additional filters

Send to:

Links from GEO DataSets

Items: 20

Send to:

Supplemental Content

Find related data

Important Links

Recent activity