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Links from GEO DataSets

Items: 4

1.

Microarray data from patients samples with triple negative breast cancer

(Submitter supplied) The genomic studies was designed to identify genes differentially expressed in tumor versus normal breast tissue. We aimed at identifying novel Antibody Drug Conjugate (ADC) targets that could be used to treat Triple Negative Breast Cancer (TNBC). Comparative genomic studies between normal breast and TNBC tissues, together with proteomic and bioinformatic analyses resulted in the elaboration of a catalog of potential ADC targets.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL6244
16 Samples
Download data: CEL
Series
Accession:
GSE185645
ID:
200185645
2.

Gene expression data from human breast cancer MDA-MB-231 cells treated with siRNAs targeting long non-coding RNA TMPO-AS1

(Submitter supplied) To examine the role of long non-coding RNA TMPO-AS1 in breast cancer, MDA-MB-231 cells were treated with siRNAs targeting TMPO-AS1 (siTMPO-AS1) or control siRNA (siControl). 3 samples
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL23126
3 Samples
Download data: CEL, CHP
Series
Accession:
GSE141925
ID:
200141925
3.

Comparative analysis of gene expression of SLC3A2 monoallelic knockout and wild type clones

(Submitter supplied) By employing a global gene expression profiling, we performed analysis of the molecular pathways which are deregulated in SLC3A2 monoallelic knockout clone generated from the head-and-neck cancer cell line Cal33 via CRISPR/Cas9 approach. Both non-irradiated and irradiated with 4Gy samples were compared.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
12 Samples
Download data: TXT
Series
Accession:
GSE116162
ID:
200116162
4.

Expression data of patient-derived triple negative breast cancer xenograft tumors

(Submitter supplied) Triple negative breast cancer (TNBC) is an aggressive subtype that lack targeted clinical therapies. In addition, TNBC is heterogeneous and was recently further sub-classified into seven TNBC subtypes that displayed unique gene expression patterns. To develop therapeutic treatment regimens, we established seven patient-derived xenograft models from TNBC tumors. These xenograft models not only retained the histology and clinical markers of the corresponding patient tumors, but also bearing the same mutations and deletions identified in the patient tumors. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL570
7 Samples
Download data: CEL
Series
Accession:
GSE47079
ID:
200047079
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