Similar studies for GEO DataSets (Select 200066362) - GEO DataSets

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Items: 15

Select item 2000663621.

RNA-seq of zebrafish brain, liver and skin during perturbation with rotenone at young and old age

(Submitter supplied) Zebrafish of two different age groups (12 and 36 months) were treated with low amounts of rotenone (mild stress) and compared to untreated zebrafish. Two different durations were used (3 and 8 weeks). Illumina sequencing (HiSeq2000) was applied to generate 50bp single-end reads. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

Organism:: Danio rerio

Type:: Expression profiling by high throughput sequencing

Platform:: GPL14875
68 Samples

Download data: XLS

Series

Accession:: GSE66362

ID:: 200066362

PubMed Similar studies SRA Run Selector

Select item 2000667122.

RNA-seq of the killifish N.furzeri during normal aging (cross-sectional and longitudinal study) and treatment with rotenone

(Submitter supplied) The study consists of three parts: 1) normal aging in liver and skin (cross-sectional); 2) treatment with rotenone in brain, liver and skin; 3) longitudinal study of 45 fish with different ages at their death measured at two different time points by fin clipping Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

Organism:: Nothobranchius furzeri

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL17944 GPL19871
185 Samples

Download data: TXT

Series

Accession:: GSE66712

ID:: 200066712

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Select item 2000524623.

RNA-seq of the brain of Nothobranchius furzeri at different time points

(Submitter supplied) Background: Comparison of temporal gene expression profiles The RNA-seq data comprises 5 age groups: 5,12,20,27,39 weeks Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

Organism:: Nothobranchius furzeri

Type:: Expression profiling by high throughput sequencing

Platform:: GPL17944
25 Samples

Download data: XLS

Series

Accession:: GSE52462

ID:: 200052462

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Select item 2001044104.

small RNA-seq of embryonic samples of N. furzeri

(Submitter supplied) small RNA-seq of embryonic samples of N. furzeri.

Organism:: Nothobranchius furzeri

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL19871
7 Samples

Download data: TXT

Series

Accession:: GSE104410

ID:: 200104410

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Select item 2001043215.

small RNA-seq of three tissues (brain, liver, skin) of Nothobranchius furzeri (at different ages) and Brain samples of 6 other killifish species

(Submitter supplied) The RNA-seq data contain 3 tissues (brain, liver, skin) of N. furzeri strains MZM-0410 and GRZ plus 2 biological replicates of brain of 6 other killifish species. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

Organism:: Iconisemion striatum; Nothobranchius furzeri; Nothobranchius pienaari; Nothobranchius kadleci; Nothobranchius rachovii; Nothobranchius kuhntae; Nothobranchius korthausae

Type:: Non-coding RNA profiling by high throughput sequencing

7 related Platforms
162 Samples

Download data: TXT

Series

Accession:: GSE104321

ID:: 200104321

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Select item 2000928546.

small RNA-seq of three tissues (brain, liver, skin) of Nothobranchius furzeri (at different ages), embryonic samples of N. furzeri and 6 other killifish species

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Nothobranchius kadleci; Nothobranchius rachovii; Iconisemion striatum; Nothobranchius furzeri; Nothobranchius kuhntae; Nothobranchius pienaari; Nothobranchius korthausae

Type:: Non-coding RNA profiling by high throughput sequencing

7 related Platforms
169 Samples

Download data: TXT

Series

Accession:: GSE92854

ID:: 200092854

PubMed Full text in PMC Similar studies

Select item 2001503187.

Longitudinal RNA-Seq study of Nothobranchius furzeri fin biopsies

(Submitter supplied) Here, we performed a longitudinal study of genome-wide gene expression in the short-lived killifish Nothobranchius furzeri (MZM-0410 strain) and correlated variations in transcript abundance at two time points during early adult life with age at death.

Organism:: Nothobranchius furzeri

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19871
228 Samples

Download data: CSV

Series

Accession:: GSE150318

ID:: 200150318

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Select item 2001501498.

RNA-seq of the brain of Nothobranchius furzeri at different time points and strains (smallRNA)

(Submitter supplied) Comparison of temporal gene expression profiles. The RNA-seq data comprises different strains (GRZ and MZM-0410) and different ages

Organism:: Nothobranchius furzeri

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL19871
16 Samples

Download data: CSV

Series

Accession:: GSE150149

ID:: 200150149

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001253739.

RNA-seq of the brain of Nothobranchius furzeri at different time points and strains

(Submitter supplied) Comparison of temporal gene expression profiles. The RNA-seq data comprises different strains (GRZ and MZM-0410) and different ages.

Organism:: Nothobranchius furzeri

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19871
16 Samples

Download data: TXT

Series

Accession:: GSE125373

ID:: 200125373

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Select item 20012463810.

Sequencing of Nothobranchius furzeri brain in two age groups

(Submitter supplied) Comparison of gene expression and ribosome profiles from Nothobranchius furzeri brain of 2 age groups. The RNA-seq and ART-seq data comprise 2 groups: 6 and 26 weeks. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

Organism:: Nothobranchius furzeri

Type:: Expression profiling by high throughput sequencing; Other

Platform:: GPL19871
16 Samples

Download data: CSV, XLS

Series

Accession:: GSE124638

ID:: 200124638

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Select item 20018303911.

RNA-Seq of Nothobranchius furzeri brain of male and female with an age of 39-108 days post hatch (dph).

(Submitter supplied) A vast body of studies is available that describes age-dependent gene expression in relationship to aging in a number of different model species. These data were obtained from animals kept in conditions with reduced environmental challenges, abundant food and deprivation of natural sensory stimulation. Here we compared wild- and captive-aging in the short-lived turquoise killifish (Nothobranchius furzeri). more...

Organism:: Nothobranchius furzeri

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19871
24 Samples

Download data: XLS

Series

Accession:: GSE183039

ID:: 200183039

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Select item 20007258412.

RNA-seq of the killifish Nothobranchius furzeri strain MZM-0410

(Submitter supplied) The study consists of 12 samples of 39-week-old N. furzeri (skin and brain). Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

Organism:: Nothobranchius furzeri

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19871
12 Samples

Download data: TXT

Series

Accession:: GSE72584

ID:: 200072584

PubMed Similar studies SRA Run Selector

Select item 20006912213.

RNA-seq of three tissues (brain, liver, skin) of Nothobranchius furzeri (at age of 12 weeks)

(Submitter supplied) The RNA-seq data contain 3 tissues (brain, liver, skin) of N.furzeri GRZ Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

Organism:: Nothobranchius furzeri

Type:: Expression profiling by high throughput sequencing

Platform:: GPL17944
15 Samples

Download data: XLS

Series

Accession:: GSE69122

ID:: 200069122

PubMed Similar studies SRA Run Selector

Select item 20004301314.

Gene Expression Defines Natural Changes in Mammalian Lifespan

(Submitter supplied) Mammals differ more than hundred fold in maximum lifespan, which can be altered in either direction during evolution, but the molecular basis for natural changes in longevity is not understood. Divergent evolution of mammals also led to extensive changes in gene expression within and between lineages. To understand the relationship between lifespan and variation in gene expression, we carried out RNA-seq-based gene expression analyses of liver, kidney and brain of 33 diverse species of mammals. more...

Organism:: Tadarida brasiliensis; Ursus americanus; Meles meles; Equus caballus; Mesocricetus auratus; Meriones unguiculatus; Chlorocebus aethiops; Felis catus; Bos taurus; Capra hircus; Oryctolagus cuniculus; Rattus norvegicus; Sus scrofa; Mus musculus; Petaurus breviceps; Murina leucogaster; Erinaceus europaeus; Suncus murinus; Canis lupus familiaris; Peromyscus leucopus; Acomys cahirinus; Cavia porcellus; Tamias sibiricus

Type:: Expression profiling by high throughput sequencing

23 related Platforms
141 Samples

Download data: GTF, TXT

Series

Accession:: GSE43013

ID:: 200043013

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Select item 20007469715.

Long non-coding RNAs in psoriatic and healthy skin

(Submitter supplied) In this study, we used RNA-sequencing to profile the long non-coding RNA (lncRNA) transcriptome in lesional skin from psoriasis patients before (PP) and after treatment (PT) with adalimumab and in normal skin from healthy individuals (NN). For this we sequenced total RNA from 18 psoriasis patients (before and after treatment) and 16 healthy controls. We created our own reference set of long non-coding RNAs by merging three long non-coding RNA reference data sets. more...