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Links from GEO DataSets

Items: 9

1.

Transcriptome changes in response to lead exposure

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Arabidopsis thaliana; Hirschfeldia incana
Type:
Expression profiling by array
Platform:
GPL12621
12 Samples
Download data: TXT
Series
Accession:
GSE65334
ID:
200065334
2.

Transcriptome changes for Arabidopsis thaliana in response to lead exposure

(Submitter supplied) Experiments were achieved on Arabidopsis thaliana. Transcriptional profiling of roots and shoots from plants treated with lead were compared to plants treated in similar conditions without lead. Four weeks old A. thaliana seedlings were treated in hydroponic cultures with Pb during 3 days, by adding or not 40 µM Pb(NO3)2.
Organism:
Arabidopsis thaliana
Type:
Expression profiling by array
Platform:
GPL12621
6 Samples
Download data: TXT
Series
Accession:
GSE65333
ID:
200065333
3.

Transcriptome changes for Hirschfeldia incana in response to lead exposure

(Submitter supplied) Experiments were achieved on Hirschfeldia incana, a Brassicaceae collected from metalliferous mine spoils as a Pb accumulator plant. Transcriptional profiling of roots and shoots from plants treated with lead were compared to plants treated in similar conditions without lead. Four weeks old H. incana seedlings were treated in hydroponic cultures with Pb during 3 days, by adding or not 100 µM Pb(NO3)2.
Organism:
Arabidopsis thaliana; Hirschfeldia incana
Type:
Expression profiling by array
Platform:
GPL12621
6 Samples
Download data: TXT
Series
Accession:
GSE65332
ID:
200065332
4.

Transcriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea

(Submitter supplied) Arabidopsis thaliana is not particularly stress tolerant and may lack protective mechanisms required to survive extreme environmental conditions. Thellungiella salsuginea has therefore attracted increasing interest as an alternative plant model species that possesses high tolerance of various abiotic stresses. While the T. salsuginea genome has recently been sequenced, its annotation is still far from complete and, due to the low number of ESTs available, evidence for actual transcriptional activity is lacking for most genes. more...
Organism:
Arabidopsis thaliana; Eutrema salsugineum
Type:
Expression profiling by array
Platforms:
GPL16263 GPL9020
24 Samples
Download data: TXT
Series
Accession:
GSE42156
ID:
200042156
5.

Response to drought stress at reproductive stage

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Oryza sativa; Oryza sativa Indica Group
Type:
Expression profiling by array
Platform:
GPL7252
90 Samples
Download data: TXT
Series
Accession:
GSE30464
ID:
200030464
6.

Changes in rice NILs root expression profile in response to drought stress at reproductive stage

(Submitter supplied) The current knowledge of drought stress transcriptomes in rice are mostly relying on comparative studies of diverse genetic background under drought. A more reliable approach is to use near-isogenic lines (NILs) with a common genetic background (Donar parent: Aday Sel, Recurrent parent: IR64), but contrasting levels of resistance to drought stress under initial exposure to water deficit. Here, we examined two pairs of NILs in IR64 background with contrasting drought tolerance. more...
Organism:
Oryza sativa Indica Group; Oryza sativa
Type:
Expression profiling by array
Platform:
GPL7252
30 Samples
Download data: TXT
Series
Accession:
GSE30463
ID:
200030463
7.

Changes in rice NILs panicle expression profile in response to drought stress at reproductive stage

(Submitter supplied) The current knowledge of drought stress transcriptomes in rice are mostly relying on comparative studies of diverse genetic background under drought. A more reliable approach is to use near-isogenic lines (NILs) with a common genetic background (Donar parent: Aday Sel, Recurrent parent: IR64), but contrasting levels of resistance to drought stress under initial exposure to water deficit. Here, we examined two pairs of NILs in IR64 background with contrasting drought tolerance. more...
Organism:
Oryza sativa Indica Group; Oryza sativa
Type:
Expression profiling by array
Platform:
GPL7252
30 Samples
Download data: TXT
Series
Accession:
GSE30462
ID:
200030462
8.

Changes in rice NILs shoot expression profile in response to drought stress at reproductive stage

(Submitter supplied) The current knowledge of drought stress transcriptomes in rice are mostly relying on comparative studies of diverse genetic background under drought. A more reliable approach is to use near-isogenic lines (NILs) with a common genetic background (Donar parent: Aday Sel, Recurrent parent: IR64), but contrasting levels of resistance to drought stress under initial exposure to water deficit. Here, we examined two pairs of NILs in IR64 background with contrasting drought tolerance. more...
Organism:
Oryza sativa Indica Group; Oryza sativa
Type:
Expression profiling by array
Platform:
GPL7252
30 Samples
Download data: TXT
Series
Accession:
GSE30449
ID:
200030449
9.

Assessing global transcriptomic changes in response to South African cassava mosaic virus [ZA-99] infection in susceptible Arabidopsis thaliana

(Submitter supplied) In susceptible plant hosts, co-evolution has favoured viral strategies to evade host defenses and utilize resources to their own benefit. The degree of manipulation of host gene expression is dependent on host-virus specificity and certain abiotic factors. In order to gain insight into global transcriptomic changes for a geminivirus pathosystem, South African cassava mosaic virus [ZA:99] (SACMV-ZA:99]) and Arabidopsis thaliana, 4 x 44K Agilent microarrays were adopted. more...
Organism:
Arabidopsis thaliana
Type:
Expression profiling by array
Platform:
GPL7299
3 Samples
Download data: GPR
Series
Accession:
GSE43282
ID:
200043282
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