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GEO DataSets

Functional Genomics Studies

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Items: 20

Select item 2000968281.

Multi-time series RNA-Seq analysis of Enterobacter lignolyticus SCF1during growth in lignin-amended medium

(Submitter supplied) The production of lignocellulosic-derived biofuels is a highly promising source of alternative energy, but it has been constrained by the lack of a microbial platform capable to efficiently degrade this recalcitrant material and cope with by-products that can be toxic to cells. Species that naturally grow in environments where carbon is mainly available as lignin are promising for finding new ways of removing the lignin that protects cellulose for improved conversion of lignin to fuel precursors.

Organism:: [Enterobacter] lignolyticus SCF1

Type:: Expression profiling by high throughput sequencing

Platform:: GPL23197
18 Samples

Download data: TXT

Series

Accession:: GSE96828

ID:: 200096828

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000231972.

AB 5500xl Genetic Analyzer (Enterobacter lignolyticus SCF1)

Organism:: [Enterobacter] lignolyticus SCF1

1 Series
18 Samples

Platform

Accession:: GPL23197

ID:: 100023197

Select item 3025447603.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544760

ID:: 302544760

SRA Run Selector

Select item 3025447594.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544759

ID:: 302544759

SRA Run Selector

Select item 3025447585.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544758

ID:: 302544758

SRA Run Selector

Select item 3025447576.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544757

ID:: 302544757

SRA Run Selector

Select item 3025447567.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544756

ID:: 302544756

SRA Run Selector

Select item 3025447558.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544755

ID:: 302544755

SRA Run Selector

Select item 3025447549.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544754

ID:: 302544754

SRA Run Selector

Select item 30254475310.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544753

ID:: 302544753

SRA Run Selector

Select item 30254475211.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544752

ID:: 302544752

SRA Run Selector

Select item 30254475112.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544751

ID:: 302544751

SRA Run Selector

Select item 30254475013.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544750

ID:: 302544750

SRA Run Selector

Select item 30254474914.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544749

ID:: 302544749

SRA Run Selector

Select item 30254474815.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544748

ID:: 302544748

SRA Run Selector

Select item 30254474716.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544747

ID:: 302544747

SRA Run Selector

Select item 30254474617.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544746

ID:: 302544746

SRA Run Selector

Select item 30254474518.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544745

ID:: 302544745

SRA Run Selector

Select item 30254474419.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544744

ID:: 302544744

SRA Run Selector

Select item 30254474320.

Organism:: [Enterobacter] lignolyticus SCF1

Source name:: Gammaproteobacteria isolated from El Yunque forest, Puerto Rico

Platform:: GPL23197
Series:: GSE96828

Download data: TXT

Sample

Accession:: GSM2544743

ID:: 302544743

SRA Run Selector

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