Tilia hoffmanniana - GEO DataSets

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Select item 2000553781.

A diet enriched with biologically active substances as a protecting factor against carcinogenesis process induced by 1,2-dimethylhydrazine in rat liver

(Submitter supplied) The aim of this study was to evaluate the ability of a diet enriched with biologically active compounds to protect against 1,2-dimethylhydrazine - induced carcinogenesis in 14-month old rats liver.

Organism:: Rattus norvegicus

Type:: Expression profiling by array

Platform:: GPL15084
12 Samples

Download data: TXT

Series

Accession:: GSE55378

ID:: 200055378

Analyze with GEO2R

Select item 2000516572.

The influence of long-term use of diet enriched with biologically active substances on transcirptomic profile in rats liver

(Submitter supplied) The aim of the study was to identify genes which are differentially expressed in the liver from rat fed with control diet and rat fed with diet enriched with biologicaly active compounds after 3 and 14 months of experiment

Organism:: Rattus norvegicus

Type:: Expression profiling by array

Platform:: GPL15084
22 Samples

Download data: TXT

Series

Accession:: GSE51657

ID:: 200051657

Analyze with GEO2R

Select item 2000220793.

De novo assembly of siRNA immunity in wild plants

(Submitter supplied) We describe an application of deep sequencing and de novo assembly of short RNA reads to investigate small interfering (si)RNAs mediated immunity in leaf samples from eight tree taxa naturally occurring in Wytham Woods, Oxfordshire, UK. BLAST search for homologues of contigs in the GenBank identified siRNA populations against a number of RNA viruses and a Ty1-copia retrotransposons in these tree species.

Organism:: Fagus sylvatica; Fraxinus excelsior; Aesculus hippocastanum; Tilia platyphyllos; Corylus avellana; Quercus robur; Betula pendula; Acer pseudoplatanus; Ulmus glabra

Type:: Non-coding RNA profiling by high throughput sequencing

Platforms:: GPL10476 GPL10477
4 Samples

Download data: TXT

Series

Accession:: GSE22079

ID:: 200022079

SRA Run Selector

Select item 1000104774.

Illumina Genome Analyzer II (Acer pseudoplatanus; Corylus avellana; Fagus sylvatica; Tilia platyphyllos; Ulmus glabra)

Organism:: Acer pseudoplatanus; Corylus avellana; Fagus sylvatica; Tilia platyphyllos; Ulmus glabra

1 Series
2 Samples

Download data

Platform

Accession:: GPL10477

ID:: 100010477

Select item 1000104765.

Illumina Genome Analyzer II (Acer pseudoplatanus; Aesculus hippocastanum; Betula pendula; Fagus sylvatica; Fraxinus excelsior; Quercus robur; Tilia platyphyllos)

Organism:: Betula pendula; Acer pseudoplatanus; Fagus sylvatica; Fraxinus excelsior; Quercus robur; Aesculus hippocastanum; Tilia platyphyllos

1 Series
2 Samples

Download data

Platform

Accession:: GPL10476

ID:: 100010476

Select item 3013350876.

DMH_14m_dmh_7

Organism:: Rattus norvegicus

Source name:: liver tissue from 1,2-dimethylhydrazine (DMH) treated group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335087

ID:: 301335087

Select item 3013350867.

DMH_14m_dmh_6

Organism:: Rattus norvegicus

Source name:: liver tissue from 1,2-dimethylhydrazine (DMH) treated group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335086

ID:: 301335086

Select item 3013350858.

DMH_14m_dmh_5

Organism:: Rattus norvegicus

Source name:: liver tissue from 1,2-dimethylhydrazine (DMH) treated group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335085

ID:: 301335085

Select item 3013350849.

DMH_14m_dmh_4

Organism:: Rattus norvegicus

Source name:: liver tissue from 1,2-dimethylhydrazine (DMH) treated group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335084

ID:: 301335084

Select item 30133508310.

DMH_14m_dmh_3

Organism:: Rattus norvegicus

Source name:: liver tissue from 1,2-dimethylhydrazine (DMH) treated group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335083

ID:: 301335083

Select item 30133508211.

DMH_14m_dmh_2

Organism:: Rattus norvegicus

Source name:: liver tissue from 1,2-dimethylhydrazine (DMH) treated group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335082

ID:: 301335082

Select item 30133508112.

DMH_14m_dmh_1

Organism:: Rattus norvegicus

Source name:: liver tissue from 1,2-dimethylhydrazine (DMH) treated group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335081

ID:: 301335081

Select item 30133508013.

Control_14m_dmh_5

Organism:: Rattus norvegicus

Source name:: liver tissue from control group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335080

ID:: 301335080

Select item 30133507914.

Control_14m_dmh_4

Organism:: Rattus norvegicus

Source name:: liver tissue from control group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335079

ID:: 301335079

Select item 30133507815.

Control_14m_dmh_3

Organism:: Rattus norvegicus

Source name:: liver tissue from control group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335078

ID:: 301335078

Select item 30133507716.

Control_14m_dmh_2

Organism:: Rattus norvegicus

Source name:: liver tissue from control group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335077

ID:: 301335077

Select item 30133507617.

Control_14m_dmh_1

Organism:: Rattus norvegicus

Source name:: liver tissue from control group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE55378

Download data: TXT

Sample

Accession:: GSM1335076

ID:: 301335076

Select item 30125021518.

Experimantal rat 6 after 14 months of experiment

Organism:: Rattus norvegicus

Source name:: liver tissue from experimental group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE51657

Download data: TXT

Sample

Accession:: GSM1250215

ID:: 301250215

Select item 30125021419.

Experimantal rat 5 after 14 months of experiment

Organism:: Rattus norvegicus

Source name:: liver tissue from experimental group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)

Platform:: GPL15084
Series:: GSE51657

Download data: TXT

Sample

Accession:: GSM1250214

ID:: 301250214

Select item 30125021320.

Experimantal rat 4 after 14 months of experiment

Organism:: Rattus norvegicus

Source name:: liver tissue from experimental group (channel 1) common reference sample compsed of total RNAs isolated from 10-week healthy rats not participating in the experiment, haused for two weeks in the same room with experimental rats (channel 2)