seneci ombrophyllus - GEO DataSets

Select item 2001986051.

HuR modulation impairs LPS-response in murine macrophages

(Submitter supplied) Lipopolysaccharide exposure to macrophages induces an inflammatory response that is heavily regulated at the post-transcriptional level. HuR, ELAVL1, is an RNA binding protein that binds and regulate the maturation and half-life of AU/U rich elements (ARE) containing cytokines and chemokines transcripts, mediating the LPS induced response. Here we investigated to what extent small molecules inhibiting HuR-RNA interaction, called tanshinone mimics, counteract the LPS induced macrophage response. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24247
27 Samples

Download data: TXT

Series

Accession:: GSE198605

ID:: 200198605

PubMed Full text in PMC Similar studies

Select item 2001206872.

The Role of the RNA-binding protein HuR in MPNST growth and metastasis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other

Platforms:: GPL10558 GPL15456 GPL16791
86 Samples

Download data

Series

Accession:: GSE120687

ID:: 200120687

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2001206863.

The Role of the RNA-binding protein HuR in MPNST growth and metastasis [ChIP-seq]

(Submitter supplied) Oncogenic gene expression programs are essential for the development and maintenance of the cancer phenotype. An emerging view is that cancer cells can develop a strong addiction to discrete molecular regulators that control these aberrant transcription programs, making these attractive targets for effective and enduring therapies. Here, we identify the RNA-binding protein HuR as a central oncogenic driver for Malignant peripheral nerve sheath tumours (MPNSTs), which are highly aggressive sarcomas that originate from cells of the Schwann cell lineage. more...

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL16791
40 Samples

Download data: BROADPEAK

Series

Accession:: GSE120686

ID:: 200120686

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001206854.

The Role of the RNA-binding protein HuR in MPNST growth and metastasis [RNA-seq]

(Submitter supplied) Oncogenic gene expression programs are essential for the development and maintenance of the cancer phenotype. An emerging view is that cancer cells can develop a strong addiction to discrete molecular regulators that control these aberrant transcription programs, making these attractive targets for effective and enduring therapies. Here, we identify the RNA-binding protein HuR as a central oncogenic driver for Malignant peripheral nerve sheath tumours (MPNSTs), which are highly aggressive sarcomas that originate from cells of the Schwann cell lineage. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL15456
6 Samples

Download data: TXT

Series

Accession:: GSE120685

ID:: 200120685

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 2001206845.

The Role of the RNA-binding protein HuR in MPNST growth and metastasis [RIP-chip]

(Submitter supplied) Oncogenic gene expression programs are essential for the development and maintenance of the cancer phenotype. An emerging view is that cancer cells can develop a strong addiction to discrete molecular regulators that control these aberrant transcription programs, making these attractive targets for effective and enduring therapies. Here, we identify the RNA-binding protein HuR as a central oncogenic driver for Malignant peripheral nerve sheath tumours (MPNSTs), which are highly aggressive sarcomas that originate from cells of the Schwann cell lineage. more...

Organism:: Homo sapiens

Type:: Other

Platform:: GPL10558
40 Samples

Download data: TXT

Series

Accession:: GSE120684

ID:: 200120684

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000943606.

Regulation of HuR structure and function by Dihydrotanshinone-I

(Submitter supplied) The Human antigen R protein (HuR) is a RNA-binding protein that recognizes U/AU-rich elements in diverse RNAs through two RNA-recognition motifs, RRM1 and RRM2, and post-transcriptionally regulates the fate of target RNAs. The natural product Dihydrotanshinone-I (DHTS) prevents the association of HuR and target RNAs in vitro and in cultured cells by interfering with the binding of HuR to RNA. Here, we report the structural determinants of the interaction between DHTS and HuR and the impact of DHTS on HuR binding to target mRNAs transcriptome-wide. more...

Organism:: Homo sapiens

Type:: Expression profiling by array

Platform:: GPL10558
8 Samples

Download data: TXT

Series

Accession:: GSE94360

ID:: 200094360

PubMed Full text in PMC Similar studies Analyze with GEO2R

GEO DataSets

Functional Genomics Studies

Result Filters

Entry type

Organism

Study type

Author

Attribute name

Publication dates

Custom date range

Additional filters

Send to:

Search results

Items: 6

Send to:

Supplemental Content

Find related data

Search details

Important Links

Recent activity