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Items: 1 to 20 of 37

1.

Piwi modulates chromatin accessibility by regulating multiple factors including histone H1 to repress transposons

(Submitter supplied) PIWI-interacting RNAs (piRNAs) mediate transposable element (TE) silencing at the transcriptional or post-transcriptional level in animal gonads. In the Drosophila ovary, Piwi–piRNA complexes (Piwi–piRISCs) repress TE transcription by modifying the chromatin state, such as H3K9me3 marks. Here, we demonstrate that Piwi physically interacts with linker histone H1. Depletion of Piwi decreases H1 density on target loci, leading to TE derepression. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Other
Platforms:
GPL17275 GPL16479
34 Samples
Download data: TXT
Series
Accession:
GSE81434
ID:
200081434

PubMed Similar studies SRA Run Selector

2.

Illumina HiSeq 2500 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
938 Series
20395 Samples
Download data
Platform
Accession:
GPL17275
ID:
100017275

3.

Illumina MiSeq (Drosophila melanogaster)

Organism:
Drosophila melanogaster
115 Series
1079 Samples
Download data
Platform
Accession:
GPL16479
ID:
100016479

4.

RNA-seq from H1-KD

Organism:
Drosophila melanogaster
Source name:
H1-KD OSC
Platform:
GPL17275
Series:
GSE81434
Download data
Sample
Accession:
GSM2152421
ID:
302152421

SRA Run Selector

5.

RNA-seq from Piwi-KD

Organism:
Drosophila melanogaster
Source name:
Piwi-KD OSC
Platform:
GPL17275
Series:
GSE81434
Download data
Sample
Accession:
GSM2152420
ID:
302152420

SRA Run Selector

6.

RNA-seq from Control-KD

Organism:
Drosophila melanogaster
Source name:
EGFP-KD OSC
Platform:
GPL17275
Series:
GSE81434
Download data
Sample
Accession:
GSM2152419
ID:
302152419

SRA Run Selector

7.

Piwi-IP smRNA-seq from H1-KD

Organism:
Drosophila melanogaster
Source name:
H1-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152452
ID:
302152452

SRA Run Selector

8.

Piwi-IP smRNA-seq from Control-KD

Organism:
Drosophila melanogaster
Source name:
Control-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152451
ID:
302152451

SRA Run Selector

9.

ATAC-seq from Mael-KD rep2

Organism:
Drosophila melanogaster
Source name:
Mael-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152450
ID:
302152450

SRA Run Selector

10.

ATAC-seq from HP1a-KD rep2

Organism:
Drosophila melanogaster
Source name:
HP1a-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152449
ID:
302152449

SRA Run Selector

11.

ATAC-seq from H1-KD rep2

Organism:
Drosophila melanogaster
Source name:
H1-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152448
ID:
302152448

SRA Run Selector

12.

ATAC-seq from Piwi-KD rep2

Organism:
Drosophila melanogaster
Source name:
Piwi-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152447
ID:
302152447

SRA Run Selector

13.

ATAC-seq from Control-KD rep2

Organism:
Drosophila melanogaster
Source name:
EGFP-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152446
ID:
302152446

SRA Run Selector

14.

ATAC-seq from Mael-KD rep1

Organism:
Drosophila melanogaster
Source name:
Mael-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152445
ID:
302152445

SRA Run Selector

15.

ATAC-seq from HP1a-KD rep1

Organism:
Drosophila melanogaster
Source name:
HP1a-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152444
ID:
302152444

SRA Run Selector

16.

ATAC-seq from H1-KD rep1

Organism:
Drosophila melanogaster
Source name:
H1-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152443
ID:
302152443

SRA Run Selector

17.

ATAC-seq from Piwi-KD rep1

Organism:
Drosophila melanogaster
Source name:
Piwi-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152442
ID:
302152442

SRA Run Selector

18.

ATAC-seq from Control-KD rep1

Organism:
Drosophila melanogaster
Source name:
EGFP-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152441
ID:
302152441

SRA Run Selector

19.

H1 ChIP-seq from HP1a-KD sample3

Organism:
Drosophila melanogaster
Source name:
HP1a-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152440
ID:
302152440

SRA Run Selector

20.

H1 ChIP-seq from Control-KD sample3

Organism:
Drosophila melanogaster
Source name:
Control-KD OSC
Platform:
GPL16479
Series:
GSE81434
Download data
Sample
Accession:
GSM2152439
ID:
302152439

SRA Run Selector

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