GSE39851[Accession] - GEO DataSets - NCBI

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Items: 4

Select item 2000398511.

VL30 retro-transposons are TRIM24-repressed enhancers that generate non-coding RNA to regulate gene expression in mouse hepatocytes. [RNA-Seq]

(Submitter supplied) TRIM24 and TRIM33 interact to form a corepressor complex that suppresses murine hepatocellular carcinoma (HCC). TRIM24 and TRIM33 cooperatively repress retinoic acid receptor dependent activity of VL30 retro-transposons in hepatocytes in vivo. In TRIM24 knockout hepatocytes, VL30 long terminal repeats (LTRs) generate enhancer (e)RNAs and act as surrogate promoter and enhancer elements deregulating expression of neighbouring genes. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL11002
2 Samples

Download data: WIG

Series

Accession:: GSE39851

ID:: 200039851

PubMed Similar studies SRA Run Selector

Select item 1000110022.

Illumina Genome Analyzer IIx (Mus musculus)

Organism:: Mus musculus

895 Series
7710 Samples

Platform

Accession:: GPL11002

ID:: 100011002

Select item 3009804023.

Organism:: Mus musculus

Source name:: liver

Platform:: GPL11002
Series:: GSE39851 GSE39853

Download data: WIG

Sample

Accession:: GSM980402

ID:: 300980402

SRA Run Selector

Select item 3009804014.

Organism:: Mus musculus

Source name:: liver

Platform:: GPL11002
Series:: GSE39851 GSE39853

Download data: WIG

Sample

Accession:: GSM980401

ID:: 300980401

SRA Run Selector

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GSE39851[Accession] (4)
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