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Series GSE39853 Query DataSets for GSE39853
Status Public on Jan 01, 2013
Title VL30 retro-transposons are TRIM24-repressed enhancers that generate non-coding RNA to regulate gene expression in mouse hepatocytes.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 23377542
Submission date Aug 02, 2012
Last update date May 15, 2019
Contact name Stephanie Le Gras
Organization name IGBMC
Street address 1, rue Laurent Fries
City ILLKIRCH Cedex
ZIP/Postal code 67404
Country France
 
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (6)
GSM980401 483_wt_RNA-seq
GSM980402 8_KO_RNA-seq
GSM980404 511_RNA-polII_CHIP-seq
This SuperSeries is composed of the following SubSeries:
GSE39851 VL30 retro-transposons are TRIM24-repressed enhancers that generate non-coding RNA to regulate gene expression in mouse hepatocytes. [RNA-Seq]
GSE39852 VL30 retro-transposons are TRIM24-repressed enhancers that generate non-coding RNA to regulate gene expression in mouse hepatocytes. [ChIP-Seq]
Relations
BioProject PRJNA171858

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39853_RAW.tar 1.2 Gb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp

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