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Items: 11

1.

Analysis of RA vs 4-oxo-RA gene expression regulation in Xenopus laevis

(Submitter supplied) We analyzed anterior halves of NF stage 15 embryos that were treated with 10uM DMSO (control), or 1uM RA and 10uM 4-oxo-RA (experimental) for changes in gene expression induced by the two mophogens. RNA-sequencing revealed significant overlap in genes upregulated by both RA and 4-oxo-RA, and to a lesser extent, those downregulated by them. We report all Zic-1 targets described in accompanying manuscript to be regulated by both RA and 4-oxo-RA.
Organism:
Xenopus laevis
Type:
Expression profiling by high throughput sequencing
Platform:
GPL17682
9 Samples
Download data: TXT
Series
Accession:
GSE180269
ID:
200180269
2.

Illumina HiSeq 2000 (Xenopus laevis)

Organism:
Xenopus laevis
41 Series
691 Samples
Download data
Platform
Accession:
GPL17682
ID:
100017682
3.

1uM RA replicate 3

Organism:
Xenopus laevis
Source name:
NF stage 15 embryo
Platform:
GPL17682
Series:
GSE180269
Download data: TXT
Sample
Accession:
GSM5456954
ID:
305456954
4.

1uM RA replicate 2

Organism:
Xenopus laevis
Source name:
NF stage 15 embryo
Platform:
GPL17682
Series:
GSE180269
Download data: TXT
Sample
Accession:
GSM5456953
ID:
305456953
5.

1uM RA replicate 1

Organism:
Xenopus laevis
Source name:
NF stage 15 embryo
Platform:
GPL17682
Series:
GSE180269
Download data: TXT
Sample
Accession:
GSM5456952
ID:
305456952
6.

10uM DMSO replicate 3

Organism:
Xenopus laevis
Source name:
NF stage 15 embryo
Platform:
GPL17682
Series:
GSE180269
Download data: TXT
Sample
Accession:
GSM5456951
ID:
305456951
7.

10uM DMSO replicate 2

Organism:
Xenopus laevis
Source name:
NF stage 15 embryo
Platform:
GPL17682
Series:
GSE180269
Download data: TXT
Sample
Accession:
GSM5456950
ID:
305456950
8.

10uM DMSO replicate 1

Organism:
Xenopus laevis
Source name:
NF stage 15 embryo
Platform:
GPL17682
Series:
GSE180269
Download data: TXT
Sample
Accession:
GSM5456949
ID:
305456949
9.

10uM 4oxoRA replicate 3

Organism:
Xenopus laevis
Source name:
NF stage 15 embryo
Platform:
GPL17682
Series:
GSE180269
Download data: TXT
Sample
Accession:
GSM5456948
ID:
305456948
10.

10uM 4oxoRA replicate 2

Organism:
Xenopus laevis
Source name:
NF stage 15 embryo
Platform:
GPL17682
Series:
GSE180269
Download data: TXT
Sample
Accession:
GSM5456947
ID:
305456947
11.

10uM 4oxoRA replicate 1

Organism:
Xenopus laevis
Source name:
NF stage 15 embryo
Platform:
GPL17682
Series:
GSE180269
Download data: TXT
Sample
Accession:
GSM5456946
ID:
305456946
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Supplemental Content

db=gds|term=GSE180269[Accession]|query=1|qty=2|blobid=MCID_669cf97156cb0a044ec1c0a0|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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