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Items: 1 to 20 of 32

1.

In vivo tissue-specific chromatin profiling in Drosophila melanogaster using GFP-tagged nuclei

(Submitter supplied) We report the application of different chromatin profiling techniques applied to cell-type specific nuclei obtained with a nuclei immuno-enrichment protocol described in this manuscript, referred as NEI protocol. By optimizing these methods, we generated genome-wide datasets associated with the nuclear RNA transcriptome, chromatin accessibility, and distribution of histone H3 and two H3 two lysine tri-methylation marks, H3K4me3 and H3K36me3 respectively. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL25244 GPL17275
29 Samples
Download data: BW, TXT
Series
Accession:
GSE169328
ID:
200169328

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina NovaSeq 6000 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
801 Series
29960 Samples
Download data
Platform
Accession:
GPL25244
ID:
100025244

3.

Illumina HiSeq 2500 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
941 Series
20427 Samples
Download data
Platform
Accession:
GPL17275
ID:
100017275

4.

Photoreceptor_H3K4me3_Rep4[CUT&Tag]

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL25244
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195794
ID:
305195794

SRA Run Selector

5.

Photoreceptor_H3K4me3_Rep3[CUT&Tag]

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL25244
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195793
ID:
305195793

SRA Run Selector

6.

Photoreceptor_H3K4me3_Rep2[CUT&Tag]

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL25244
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195792
ID:
305195792

SRA Run Selector

7.

Photoreceptor_H3K4me3_Rep1[CUT&Tag]

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL25244
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195791
ID:
305195791

SRA Run Selector

8.

Photoreceptor_100ng_ATAC-seq

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195803
ID:
305195803

SRA Run Selector

9.

Photoreceptor_50ng_ATAC-seq

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195802
ID:
305195802

SRA Run Selector

10.

Photoreceptor_RNA-seq_Rep3

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data
Sample
Accession:
GSM5195801
ID:
305195801

SRA Run Selector

11.

Photoreceptor_RNA-seq_Rep2

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data
Sample
Accession:
GSM5195800
ID:
305195800

SRA Run Selector

12.

Photoreceptor_RNA-seq_Rep1

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data
Sample
Accession:
GSM5195799
ID:
305195799

SRA Run Selector

13.

Photoreceptor_ATAC-seq_Rep4

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195798
ID:
305195798

SRA Run Selector

14.

Photoreceptor_ATAC-seq_Rep3

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195797
ID:
305195797

SRA Run Selector

15.

Photoreceptor_ATAC-seq_Rep2

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195796
ID:
305195796

SRA Run Selector

16.

Photoreceptor_ATAC-seq_Rep1

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195795
ID:
305195795

SRA Run Selector

17.

Photoreceptor_H3K36me3_Rep4

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195790
ID:
305195790

SRA Run Selector

18.

Photoreceptor_H3K36me3_Rep3

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195789
ID:
305195789

SRA Run Selector

19.

Photoreceptor_H3K36me3_Rep2

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195788
ID:
305195788

SRA Run Selector

20.

Photoreceptor_H3K36me3_Rep1

Organism:
Drosophila melanogaster
Source name:
Retina
Platform:
GPL17275
Series:
GSE169328
Download data: BW
Sample
Accession:
GSM5195787
ID:
305195787

SRA Run Selector

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db=gds|term=GSE169328[Accession]|query=2|qty=2|blobid=MCID_672fd1aeb084802e753d2076|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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