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Items: 1 to 20 of 26

1.

Next generation sequencing analysis of control and KSR1 knockdown CRC cell line translatomes.

(Submitter supplied) KSR1 signaling alters the translational landscape of human CRC cells to support their survival. To determine the effect of KSR1 on translatomes in colon cancer cells, we performed genome-wide polysome profiling. We stably expressed short hairpin RNA (shRNA) constructs targeting KSR1 or a non-targeting control in two K-Ras mutant CRC cell lines, HCT116 and HCT15. We isolated and quantified both total mRNA and efficiently translated mRNAs (associated with ≥ 3 ribosomes) using RNA sequencing. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21697
24 Samples
Download data: TXT
Series
Accession:
GSE164492
ID:
200164492

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

NextSeq 550 (Homo sapiens)

Organism:
Homo sapiens
1463 Series
43623 Samples
Download data
Platform
Accession:
GPL21697
ID:
100021697

3.

HCT15 shKSR1 Poly Rep3

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012151
ID:
305012151

SRA Run Selector

4.

HCT15 shKSR1 Total Rep3

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012150
ID:
305012150

SRA Run Selector

5.

HCT15 Con Poly Rep3

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012149
ID:
305012149

SRA Run Selector

6.

HCT15 Con Total Rep3

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012148
ID:
305012148

SRA Run Selector

7.

HCT116 shKSR1 Poly Rep3

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012147
ID:
305012147

SRA Run Selector

8.

HCT116 shKSR1 Total Rep3

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012146
ID:
305012146

SRA Run Selector

9.

HCT116 Con Poly Rep3

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012145
ID:
305012145

SRA Run Selector

10.

HCT116 Con Total Rep3

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012144
ID:
305012144

SRA Run Selector

11.

HCT15 shKSR1 Poly Rep2

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012143
ID:
305012143

SRA Run Selector

12.

HCT15 shKSR1 Total Rep2

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012142
ID:
305012142

SRA Run Selector

13.

HCT15 Con Poly Rep2

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012141
ID:
305012141

SRA Run Selector

14.

HCT15 Con Total Rep2

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012140
ID:
305012140

SRA Run Selector

15.

HCT116 shKSR1 Poly Rep2

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012139
ID:
305012139

SRA Run Selector

16.

HCT116 shKSR1 Total Rep2

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012138
ID:
305012138

SRA Run Selector

17.

HCT116 Con Poly Rep2

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012137
ID:
305012137

SRA Run Selector

18.

HCT116 Con Total Rep2

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012136
ID:
305012136

SRA Run Selector

19.

HCT15 shKSR1 Poly Rep1

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012135
ID:
305012135

SRA Run Selector

20.

HCT15 shKSR1 Total Rep1

Organism:
Homo sapiens
Source name:
Colorectal Cancer Cell line
Platform:
GPL21697
Series:
GSE164492
Download data
Sample
Accession:
GSM5012134
ID:
305012134

SRA Run Selector

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