GSE126890[Accession] - GEO DataSets - NCBI

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Tissue Specific Methylation and Expression Patterns of ADCA-DN Patients

(Submitter supplied) Autosomal dominant cerebellar ataxia, deafness, and narcolepsy (ADCA-DN) is a late onset disorder, due to mutations in DNA methyltransferase type 1 (DNMT1). Yet our understanding of how these mutations in DNMT1 lead to the clinical phenotypes of ADCA-DN is still unclear. To address this, we used fibroblasts, induced pluripotent stem cells (iPSCs) and induced neurons (iNs) generated from patients with ADCA-DN and controls, to determine the underlining epigenomic changes. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing

Platforms:: GPL21697 GPL20301
56 Samples

Download data: TXT

Series

Accession:: GSE126890

ID:: 200126890

Analyze with GEO2R SRA Run Selector

Select item 1000216972.

NextSeq 550 (Homo sapiens)

Organism:: Homo sapiens

1487 Series
44345 Samples

Platform

Accession:: GPL21697

ID:: 100021697

Select item 1000203013.

Illumina HiSeq 4000 (Homo sapiens)

Organism:: Homo sapiens

8491 Series
195008 Samples

Platform

Accession:: GPL20301

ID:: 100020301

Select item 3036177594.

MS-Blood Methylation

Organism:: Homo sapiens

Source name:: blood

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617759

ID:: 303617759

SRA Run Selector

Select item 3036177585.

GR-Blood Methylation

Organism:: Homo sapiens

Source name:: blood

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617758

ID:: 303617758

SRA Run Selector

Select item 3036177576.

F01-Blood Methylation

Organism:: Homo sapiens

Source name:: blood

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617757

ID:: 303617757

SRA Run Selector

Select item 3036177567.

MK-Blood Methylation

Organism:: Homo sapiens

Source name:: blood

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617756

ID:: 303617756

SRA Run Selector

Select item 3036177558.

F03-Blood Methylation

Organism:: Homo sapiens

Source name:: blood

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617755

ID:: 303617755

SRA Run Selector

Select item 3036177549.

81214-Blood Methylation

Organism:: Homo sapiens

Source name:: blood

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617754

ID:: 303617754

SRA Run Selector

Select item 30361775310.

MS-FB Methylation

Organism:: Homo sapiens

Source name:: fibroblast

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617753

ID:: 303617753

SRA Run Selector

Select item 30361775211.

MS-3iPSC Methylation

Organism:: Homo sapiens

Source name:: induced pluripotent stem cell

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617752

ID:: 303617752

SRA Run Selector

Select item 30361775112.

MS-3iN Methylation

Organism:: Homo sapiens

Source name:: induced neuron

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617751

ID:: 303617751

SRA Run Selector

Select item 30361775013.

MS-1iPSC Methylation

Organism:: Homo sapiens

Source name:: induced pluripotent stem cell

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617750

ID:: 303617750

SRA Run Selector

Select item 30361774914.

MS-1iN Methylation

Organism:: Homo sapiens

Source name:: induced neuron

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617749

ID:: 303617749

SRA Run Selector

Select item 30361774815.

F03-FB Methylation

Organism:: Homo sapiens

Source name:: fibroblast

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617748

ID:: 303617748

SRA Run Selector

Select item 30361774716.

F03-3iPSC Methylation

Organism:: Homo sapiens

Source name:: induced pluripotent stem cell

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617747

ID:: 303617747

SRA Run Selector

Select item 30361774617.

F03-3iN Methylation

Organism:: Homo sapiens

Source name:: induced neuron

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617746

ID:: 303617746

SRA Run Selector

Select item 30361774518.

F03-1iPSC Methylation

Organism:: Homo sapiens

Source name:: induced pluripotent stem cell

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617745

ID:: 303617745

SRA Run Selector

Select item 30361774419.

F03-1iN Methylation

Organism:: Homo sapiens

Source name:: induced neuron

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617744

ID:: 303617744

SRA Run Selector

Select item 30361774320.

F01-FB Methylation

Organism:: Homo sapiens

Source name:: fibroblast

Platform:: GPL20301
Series:: GSE126890

Download data: TXT

Sample

Accession:: GSM3617743

ID:: 303617743

SRA Run Selector

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