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Items: 1 to 20 of 31

1.

The Nuclear Matrix Protein SAFB Cooperates with Major Satellite RNAs to Stabilize Heterochromatin Architecture Partially through Phase Separation

(Submitter supplied) Interphase chromatin is hierarchically organized into higher-order architectures that are essential for gene functions, yet the biomolecules that regulate these 3D architectures remain poorly understood. Here, we show that scaffold attachment factor B (SAFB), a nuclear matrix (NM)-associated protein with RNA-binding functions, modulates chromatin condensation and stabilizes heterochromatin foci in mouse cells. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL10448 GPL21273
28 Samples
Download data: BIGWIG, HIC, TXT
Series
Accession:
GSE125037
ID:
200125037
2.

HiSeq X Ten (Mus musculus)

Platform
Accession:
GPL21273
ID:
100021273
3.

Agilent-027414 SurePrint G3 Mouse CGH Microarray 1x1M

(Submitter supplied) Arrays of this design have barcodes that begin with 16027414 or 2527414. Data table annotations based on NCBI Build 37 (UCSC mm9), July 2007. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. more...
Organism:
Mus musculus
20 Series
422 Samples
Download data
Platform
Accession:
GPL10448
ID:
100010448
4.

ADamID ML12_shSafb_rep2

Organism:
Mus musculus
Source name:
AML12 (channel 1) AML12 (channel 2)
Platform:
GPL10448
Series:
GSE125037 GSE141109
Download data: TXT
Sample
Accession:
GSM4195046
ID:
304195046
5.

DamID AML12_shSafb_rep1

Organism:
Mus musculus
Source name:
AML12 (channel 1) AML12 (channel 2)
Platform:
GPL10448
Series:
GSE125037 GSE141109
Download data: TXT
Sample
Accession:
GSM4195045
ID:
304195045
6.

DamID AML12_shCtrl_rep2

Organism:
Mus musculus
Source name:
AML12 (channel 1) AML12 (channel 2)
Platform:
GPL10448
Series:
GSE125037 GSE141109
Download data: TXT
Sample
Accession:
GSM4195044
ID:
304195044
7.

DamID AML12_shCtrl_rep1

Organism:
Mus musculus
Source name:
AML12 (channel 1) AML12 (channel 2)
Platform:
GPL10448
Series:
GSE125037 GSE141109
Download data: TXT
Sample
Accession:
GSM4195043
ID:
304195043
8.

SAFB-K9me3-HiChip-Rep2-plus

Organism:
Mus musculus
Source name:
AML12 shSafb
Platform:
GPL21273
Series:
GSE125037 GSE141113
Download data
Sample
Accession:
GSM4195089
ID:
304195089
9.

SAFB-K9me3-HiChip-Rep2

Organism:
Mus musculus
Source name:
AML12 shSafb
Platform:
GPL21273
Series:
GSE125037 GSE141113
Download data
Sample
Accession:
GSM4195088
ID:
304195088
10.

SAFB-K9me3-HiChip-Rep1-plus

Organism:
Mus musculus
Source name:
AML12 shSafb
Platform:
GPL21273
Series:
GSE125037 GSE141113
Download data
Sample
Accession:
GSM4195087
ID:
304195087
11.

SAFB-K9me3-HiChip-Rep1

Organism:
Mus musculus
Source name:
AML12 shSafb
Platform:
GPL21273
Series:
GSE125037 GSE141113
Download data
Sample
Accession:
GSM4195086
ID:
304195086
12.

Control-K9me3-HiChip-Rep2-plus

Organism:
Mus musculus
Source name:
AML12 shCtrl
Platform:
GPL21273
Series:
GSE125037 GSE141113
Download data
Sample
Accession:
GSM4195085
ID:
304195085
13.

Control-K9me3-HiChip-Rep2

Organism:
Mus musculus
Source name:
AML12 shCtrl
Platform:
GPL21273
Series:
GSE125037 GSE141113
Download data
Sample
Accession:
GSM4195084
ID:
304195084
14.

Control-K9me3-HiChip-Rep1-plus

Organism:
Mus musculus
Source name:
AML12 shCtrl
Platform:
GPL21273
Series:
GSE125037 GSE141113
Download data
Sample
Accession:
GSM4195083
ID:
304195083
15.

Control-K9me3-HiChip-Rep1

Organism:
Mus musculus
Source name:
AML12 shCtrl
Platform:
GPL21273
Series:
GSE125037 GSE141113
Download data
Sample
Accession:
GSM4195082
ID:
304195082
16.

ChIP-seq AML12 shSafb-2

Organism:
Mus musculus
Source name:
AML12 Safb KD (shSafb)
Platform:
GPL21273
Series:
GSE125037 GSE141104
Download data: BIGWIG
Sample
Accession:
GSM4195026
ID:
304195026
17.

ChIP-seq AML12 shSafb-1

Organism:
Mus musculus
Source name:
AML12 Safb KD (shSafb)
Platform:
GPL21273
Series:
GSE125037 GSE141104
Download data: BIGWIG
Sample
Accession:
GSM4195025
ID:
304195025
18.

ChIP-seq AML12 shCtrl-2

Organism:
Mus musculus
Source name:
AML12 shCtrl
Platform:
GPL21273
Series:
GSE125037 GSE141104
Download data: BIGWIG
Sample
Accession:
GSM4195024
ID:
304195024
19.

ChIP-seq AML12 shCtrl-1

Organism:
Mus musculus
Source name:
AML12 shCtrl
Platform:
GPL21273
Series:
GSE125037 GSE141104
Download data: BIGWIG
Sample
Accession:
GSM4195023
ID:
304195023
20.

SAFB_RIPseq_rep2

Organism:
Mus musculus
Source name:
AML12 SAFB
Platform:
GPL21273
Series:
GSE125037 GSE141084
Download data
Sample
Accession:
GSM4194774
ID:
304194774
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