U.S. flag

An official website of the United States government

Format
Items per page
Sort by

Send to:

Choose Destination

Search results

Items: 8

1.

Comparison of single-cell transcriptomics quality between unfixed cells and cells that were fixed and mock stained according to the RAID procedure

(Submitter supplied) Cell fixation, permeabilization and antibody staining of could have adverse effects on the quality of single cell transcriptomics data. To assess the effects of the RAID procedure, which includes such steps, we performed a direct comparison of single cell transcriptomics by CELseq2 using unfixed and RAID-processed cells. Quality measures (gene complexity, gene detection rate, average gene expression) were performed using 40000 samples UMI counts per cell.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
6 Samples
Download data: CSV, TAB
Series
Accession:
GSE115861
ID:
200115861

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina NextSeq 500 (Homo sapiens)

Organism:
Homo sapiens
12545 Series
342558 Samples
Download data
Platform
Accession:
GPL18573
ID:
100018573

3.

RAID_SetC

Organism:
Homo sapiens
Source name:
Foreskin keratinocytes
Platform:
GPL18573
Series:
GSE115861 GSE115981
Download data
Sample
Accession:
GSM3192004
ID:
303192004

SRA Run Selector

4.

RAID_SetB

Organism:
Homo sapiens
Source name:
Foreskin keratinocytes
Platform:
GPL18573
Series:
GSE115861 GSE115981
Download data
Sample
Accession:
GSM3192003
ID:
303192003

SRA Run Selector

5.

RAID_SetA

Organism:
Homo sapiens
Source name:
Foreskin keratinocytes
Platform:
GPL18573
Series:
GSE115861 GSE115981
Download data
Sample
Accession:
GSM3192002
ID:
303192002

SRA Run Selector

6.

Unfixed_SetC

Organism:
Homo sapiens
Source name:
Foreskin keratinocytes
Platform:
GPL18573
Series:
GSE115861 GSE115981
Download data
Sample
Accession:
GSM3192001
ID:
303192001

SRA Run Selector

7.

Unfixed_SetB

Organism:
Homo sapiens
Source name:
Foreskin keratinocytes
Platform:
GPL18573
Series:
GSE115861 GSE115981
Download data
Sample
Accession:
GSM3192000
ID:
303192000

SRA Run Selector

8.

Unfixed_SetA

Organism:
Homo sapiens
Source name:
Foreskin keratinocytes
Platform:
GPL18573
Series:
GSE115861 GSE115981
Download data
Sample
Accession:
GSM3191999
ID:
303191999

SRA Run Selector

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Filters: Manage Filters

db=gds|term=GSE115861[Accession]|query=6|qty=2|blobid=MCID_6736a9ad5ff35f4f671f44e5|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Important Links

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets
Support Center