nsv966348
- Study:nstd82 (Sudmant et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:80
- Validation:Yes
- Clinical Assertions: No
- Region Size:92,090
- Publication(s):Sudmant et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1285 SVs from 88 studies. See in: genome view
Overlapping variant regions from other studies: 580 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 1299 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 508 SVs from 29 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv966348 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nsv966348 | Remapped | Pass | GRCh38.p12 | ALT_REF_LOCI_3 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nsv966348 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 190,469,701 | 190,552,038 |
| nsv966348 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 190,706,695 | 190,789,032 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv2343772 | duplication | Homo_denisova-Denisova_30x | Sequencing | Read depth | 19,139 |
| nssv2343773 | duplication | SAMN01920473 | Sequencing | Read depth | 13,799 |
| nssv2343774 | duplication | SAMN01920474 | Sequencing | Read depth | 13,812 |
| nssv2343775 | duplication | SAMN01920476 | Sequencing | Read depth | 13,908 |
| nssv2343776 | duplication | SAMN01920492 | Sequencing | Read depth | 13,471 |
| nssv2343777 | duplication | SAMN01920493 | Sequencing | Read depth | 13,471 |
| nssv2343778 | duplication | SAMN01920494 | Sequencing | Read depth | 13,471 |
| nssv2343779 | duplication | SAMN01920495 | Sequencing | Read depth | 13,471 |
| nssv2343780 | duplication | SAMN01920496 | Sequencing | Read depth | 13,471 |
| nssv2343781 | duplication | SAMN01920477 | Sequencing | Read depth | 13,641 |
| nssv2343782 | duplication | SAMN01920479 | Sequencing | Read depth | 13,667 |
| nssv2343783 | duplication | SAMN01920478 | Sequencing | Read depth | 13,652 |
| nssv2343784 | duplication | SAMN01920480 | Sequencing | Read depth | 13,643 |
| nssv2343785 | duplication | Gorilla_gorilla_gorilla-9753_Kokomo | Sequencing | Read depth | 13,644 |
| nssv2343786 | duplication | SAMN01920483 | Sequencing | Read depth | 13,645 |
| nssv2343787 | duplication | SAMN01920484 | Sequencing | Read depth | 13,628 |
| nssv2343788 | duplication | SAMN01920485 | Sequencing | Read depth | 13,644 |
| nssv2343789 | duplication | Gorilla_gorilla_gorilla-A935_Fritz | Sequencing | Read depth | 13,652 |
| nssv2343790 | duplication | SAMN01920487 | Sequencing | Read depth | 13,625 |
| nssv2343791 | duplication | SAMN01920489 | Sequencing | Read depth | 13,471 |
| nssv2343792 | duplication | Gorilla_gorilla_gorilla-Snowflake | Sequencing | Read depth | 13,657 |
| nssv2343793 | duplication | SAMN01920490 | Sequencing | Read depth | 13,471 |
| nssv2343794 | duplication | SAMN01920491 | Sequencing | Read depth | 13,671 |
| nssv2343795 | duplication | HGDP01307 | Sequencing | Read depth | 17,161 |
| nssv2343796 | duplication | HGDP00521 | Sequencing | Read depth | 17,171 |
| nssv2343797 | duplication | HGDP00778 | Sequencing | Read depth | 17,185 |
| nssv2343798 | duplication | HGDP00998 | Sequencing | Read depth | 17,267 |
| nssv2343799 | duplication | HGDP01284 | Sequencing | Read depth | 17,196 |
| nssv2343800 | duplication | HGDP00456 | Sequencing | Read depth | 17,189 |
| nssv2343801 | duplication | HGDP00542 | Sequencing | Read depth | 17,157 |
| nssv2343802 | duplication | HGDP01029 | Sequencing | Read depth | 17,182 |
| nssv2343803 | duplication | HGDP00665 | Sequencing | Read depth | 17,185 |
| nssv2343804 | duplication | HGDP00927 | Sequencing | Read depth | 17,185 |
| nssv2343805 | duplication | SAMN01920504 | Sequencing | Read depth | 14,831 |
| nssv2343806 | duplication | SAMN01920506 | Sequencing | Read depth | 14,796 |
| nssv2343807 | duplication | SAMN01920507 | Sequencing | Read depth | 14,643 |
| nssv2343808 | duplication | SAMN01920508 | Sequencing | Read depth | 14,784 |
| nssv2343809 | duplication | SAMN01920509 | Sequencing | Read depth | 14,796 |
| nssv2343810 | duplication | Pan_paniscus-A920_Kidogo | Sequencing | Read depth | 14,643 |
| nssv2343811 | duplication | SAMN01920510 | Sequencing | Read depth | 14,643 |
| nssv2343812 | duplication | SAMN01920511 | Sequencing | Read depth | 14,796 |
| nssv2343813 | duplication | SAMN01920513 | Sequencing | Read depth | 14,803 |
| nssv2343814 | duplication | SAMN01920514 | Sequencing | Read depth | 14,790 |
| nssv2343815 | duplication | SAMN01920515 | Sequencing | Read depth | 14,814 |
| nssv2343816 | duplication | SAMN01920516 | Sequencing | Read depth | 14,643 |
| nssv2343817 | duplication | Pan_paniscus-A951_Pongo | Sequencing | Read depth | 14,643 |
| nssv2343818 | duplication | Pan_paniscus-X00095_Kakowet | Sequencing | Read depth | 14,858 |
| nssv2343819 | duplication | SAMN01920517 | Sequencing | Read depth | 14,560 |
| nssv2343820 | duplication | SAMN01920518 | Sequencing | Read depth | 14,544 |
| nssv2343821 | duplication | SAMN01920519 | Sequencing | Read depth | 14,560 |
| nssv2343822 | duplication | SAMN01920520 | Sequencing | Read depth | 14,560 |
| nssv2343823 | duplication | SAMN01920521 | Sequencing | Read depth | 14,554 |
| nssv2343824 | duplication | SAMN01920523 | Sequencing | Read depth | 14,551 |
| nssv2343825 | duplication | SAMN01920524 | Sequencing | Read depth | 14,557 |
| nssv2343826 | duplication | SAMN01920525 | Sequencing | Read depth | 14,553 |
| nssv2343827 | duplication | SAMN01920526 | Sequencing | Read depth | 14,541 |
| nssv2343828 | duplication | SAMN01920522 | Sequencing | Read depth | 14,557 |
| nssv2343829 | duplication | SAMN01920527 | Sequencing | Read depth | 14,562 |
| nssv2343830 | duplication | SAMN01920528 | Sequencing | Read depth | 14,776 |
| nssv2343831 | duplication | SAMN01920531 | Sequencing | Read depth | 14,608 |
| nssv2343832 | duplication | SAMN01920532 | Sequencing | Read depth | 14,576 |
| nssv2343833 | duplication | Pan_troglodytes_schweinfurthii-Yolanda | Sequencing | Read depth | 14,664 |
| nssv2343834 | duplication | SAMN01920529 | Sequencing | Read depth | 14,610 |
| nssv2343835 | duplication | SAMN01920534 | Sequencing | Read depth | 14,815 |
| nssv2343836 | duplication | SAMN01920536 | Sequencing | Read depth | 15,183 |
| nssv2343837 | duplication | SAMN01920541 | Sequencing | Read depth | 14,615 |
| nssv2343838 | duplication | Pan_troglodytes_verus-A907_Susie_A | Sequencing | Read depth | 14,602 |
| nssv2343839 | duplication | SAMN01920537 | Sequencing | Read depth | 14,600 |
| nssv2343840 | duplication | SAMN01920540 | Sequencing | Read depth | 14,584 |
| nssv2343841 | duplication | SAMN01920539 | Sequencing | Read depth | 14,708 |
| nssv2343842 | duplication | SAMN01920499 | Sequencing | Read depth | 13,641 |
| nssv2343843 | duplication | SAMN01920502 | Sequencing | Read depth | 13,644 |
| nssv2344636 | duplication | SAMN01920503 | Sequencing | Read depth | 13,626 |
| nssv2344637 | duplication | SAMN01920497 | Sequencing | Read depth | 13,633 |
| nssv2344638 | duplication | SAMN01920500 | Sequencing | Read depth | 13,643 |
| nssv2344639 | duplication | SAMN01920501 | Sequencing | Read depth | 13,643 |
| nssv2344640 | duplication | SAMN01920498 | Sequencing | Read depth | 13,636 |
| nssv2344641 | duplication | Gorilla_gorilla_gorilla-Kwan | Sequencing | Read depth | 13,471 |
| nssv2344642 | duplication | Gorilla_beringei_graueri-Mukisi | Sequencing | Read depth | 13,597 |
| nssv2344643 | duplication | Gorilla_gorilla_gorilla-Kamilah | Sequencing | Read depth | 13,471 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2343772 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343773 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343774 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343775 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343776 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343777 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343778 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343779 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343780 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343781 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343782 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343783 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343784 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343785 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343786 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343787 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343788 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343789 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343790 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343791 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343792 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343793 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343794 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343795 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343796 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343797 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343798 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343799 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343800 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343801 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343802 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343803 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343804 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343805 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343806 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343807 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343808 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343809 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343810 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343811 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343812 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343813 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343814 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343815 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343816 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343817 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343818 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343819 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343820 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343821 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343822 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343823 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343824 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343825 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343826 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343827 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343828 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343829 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343830 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343831 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343832 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343833 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343834 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343835 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343836 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343837 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343838 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343839 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343840 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343841 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343842 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343843 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2344636 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2344637 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2344638 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2344639 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2344640 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2344641 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2344642 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2344643 | Remapped | Pass | NT_187679.1:g.(?_1 86769)_(278858_?)d up | GRCh38.p12 | Second Pass | NT_187679.1 | Chr4|NT_18 7679.1 | 186,769 | 278,858 |
| nssv2343772 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343773 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343774 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343775 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343776 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343777 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343778 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343779 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343780 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343781 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343782 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343783 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343784 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343785 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343786 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343787 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343788 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343789 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343790 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
| nssv2343791 | Remapped | Perfect | NC_000004.12:g.(?_ 189548547)_(189630 884_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 189,548,547 | 189,630,884 |
Validation Information
| Variant Call ID | Experiment ID | Sample ID | Method | Analysis | Result |
|---|---|---|---|---|---|
| nssv2344642 | 11 | Gorilla_beringei_graueri-Mukisi | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343785 | 11 | Gorilla_gorilla_gorilla-9753_Kokomo | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343789 | 11 | Gorilla_gorilla_gorilla-A935_Fritz | Oligo aCGH | Probe signal intensity | Pass |
| nssv2344643 | 11 | Gorilla_gorilla_gorilla-Kamilah | Oligo aCGH | Probe signal intensity | Pass |
| nssv2344641 | 11 | Gorilla_gorilla_gorilla-Kwan | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343792 | 11 | Gorilla_gorilla_gorilla-Snowflake | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343800 | 11 | HGDP00456 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343796 | 11 | HGDP00521 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343801 | 11 | HGDP00542 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343803 | 11 | HGDP00665 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343797 | 11 | HGDP00778 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343804 | 11 | HGDP00927 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343798 | 11 | HGDP00998 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343802 | 11 | HGDP01029 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343799 | 11 | HGDP01284 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343795 | 11 | HGDP01307 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343772 | 11 | Homo_denisova-Denisova_30x | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343810 | 11 | Pan_paniscus-A920_Kidogo | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343817 | 11 | Pan_paniscus-A951_Pongo | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343818 | 11 | Pan_paniscus-X00095_Kakowet | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343833 | 11 | Pan_troglodytes_schweinfurthii-Yolanda | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343838 | 11 | Pan_troglodytes_verus-A907_Susie_A | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343773 | 11 | SAMN01920473 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343774 | 11 | SAMN01920474 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343775 | 11 | SAMN01920476 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343781 | 11 | SAMN01920477 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343783 | 11 | SAMN01920478 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343782 | 11 | SAMN01920479 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343784 | 11 | SAMN01920480 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343786 | 11 | SAMN01920483 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343787 | 11 | SAMN01920484 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343788 | 11 | SAMN01920485 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343790 | 11 | SAMN01920487 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343791 | 11 | SAMN01920489 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343793 | 11 | SAMN01920490 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343794 | 11 | SAMN01920491 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343776 | 11 | SAMN01920492 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343777 | 11 | SAMN01920493 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343778 | 11 | SAMN01920494 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343779 | 11 | SAMN01920495 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343780 | 11 | SAMN01920496 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2344637 | 11 | SAMN01920497 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2344640 | 11 | SAMN01920498 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343842 | 11 | SAMN01920499 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2344638 | 11 | SAMN01920500 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2344639 | 11 | SAMN01920501 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343843 | 11 | SAMN01920502 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2344636 | 11 | SAMN01920503 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343805 | 11 | SAMN01920504 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343806 | 11 | SAMN01920506 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343807 | 11 | SAMN01920507 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343808 | 11 | SAMN01920508 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343809 | 11 | SAMN01920509 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343811 | 11 | SAMN01920510 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343812 | 11 | SAMN01920511 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343813 | 11 | SAMN01920513 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343814 | 11 | SAMN01920514 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343815 | 11 | SAMN01920515 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343816 | 11 | SAMN01920516 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343819 | 11 | SAMN01920517 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343820 | 11 | SAMN01920518 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343821 | 11 | SAMN01920519 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343822 | 11 | SAMN01920520 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343823 | 11 | SAMN01920521 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343828 | 11 | SAMN01920522 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343824 | 11 | SAMN01920523 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343825 | 11 | SAMN01920524 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343826 | 11 | SAMN01920525 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343827 | 11 | SAMN01920526 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343829 | 11 | SAMN01920527 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343830 | 11 | SAMN01920528 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343834 | 11 | SAMN01920529 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343831 | 11 | SAMN01920531 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343832 | 11 | SAMN01920532 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343835 | 11 | SAMN01920534 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343836 | 11 | SAMN01920536 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343839 | 11 | SAMN01920537 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343841 | 11 | SAMN01920539 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343840 | 11 | SAMN01920540 | Oligo aCGH | Probe signal intensity | Pass |
| nssv2343837 | 11 | SAMN01920541 | Oligo aCGH | Probe signal intensity | Pass |