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dbVar

Database of genomic structural variation

nsv830890

Organism: Homo sapiens

Study:nstd68 (Wong et al. 2006)
Variant Type:copy number variation
Method Type:BAC aCGH
Submitted on:NCBI35 (hg17)

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:240,226

Publication(s):Wong et al. 2006

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1194 SVs from 83 studies. See in: genome view

Remapped(Score: Perfect):5,425,302-5,665,527

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv830890	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	5,425,302	5,665,527
nsv830890	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	5,464,933	5,705,158
nsv830890	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000007.11	Chr7	5,238,174	5,478,399

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv1445891	copy number loss	BAC aCGH	Probe signal intensity
nssv1445892	copy number loss	BAC aCGH	Probe signal intensity
nssv1445893	copy number loss	BAC aCGH	Probe signal intensity
nssv1445894	copy number loss	BAC aCGH	Probe signal intensity
nssv1445896	copy number loss	BAC aCGH	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nssv1445891	Remapped	Perfect	NC_000007.14:g.(54 25302_?)_(?_566552 7)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	5,425,302	5,665,527
nssv1445892	Remapped	Perfect	NC_000007.14:g.(54 25302_?)_(?_566552 7)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	5,425,302	5,665,527
nssv1445893	Remapped	Perfect	NC_000007.14:g.(54 25302_?)_(?_566552 7)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	5,425,302	5,665,527
nssv1445894	Remapped	Perfect	NC_000007.14:g.(54 25302_?)_(?_566552 7)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	5,425,302	5,665,527
nssv1445896	Remapped	Perfect	NC_000007.14:g.(54 25302_?)_(?_566552 7)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	5,425,302	5,665,527
nssv1445891	Remapped	Perfect	NC_000007.13:g.(54 64933_?)_(?_570515 8)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	5,464,933	5,705,158
nssv1445892	Remapped	Perfect	NC_000007.13:g.(54 64933_?)_(?_570515 8)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	5,464,933	5,705,158
nssv1445893	Remapped	Perfect	NC_000007.13:g.(54 64933_?)_(?_570515 8)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	5,464,933	5,705,158
nssv1445894	Remapped	Perfect	NC_000007.13:g.(54 64933_?)_(?_570515 8)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	5,464,933	5,705,158
nssv1445896	Remapped	Perfect	NC_000007.13:g.(54 64933_?)_(?_570515 8)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	5,464,933	5,705,158
nssv1445891	Submitted genomic		NC_000007.11:g.(52 38174_?)_(?_547839 9)del	NCBI35 (hg17)		NC_000007.11	Chr7	5,238,174	5,478,399
nssv1445892	Submitted genomic		NC_000007.11:g.(52 38174_?)_(?_547839 9)del	NCBI35 (hg17)		NC_000007.11	Chr7	5,238,174	5,478,399
nssv1445893	Submitted genomic		NC_000007.11:g.(52 38174_?)_(?_547839 9)del	NCBI35 (hg17)		NC_000007.11	Chr7	5,238,174	5,478,399
nssv1445894	Submitted genomic		NC_000007.11:g.(52 38174_?)_(?_547839 9)del	NCBI35 (hg17)		NC_000007.11	Chr7	5,238,174	5,478,399
nssv1445896	Submitted genomic		NC_000007.11:g.(52 38174_?)_(?_547839 9)del	NCBI35 (hg17)		NC_000007.11	Chr7	5,238,174	5,478,399

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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