nsv830890
- Organism: Homo sapiens
- Study:nstd68 (Wong et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI35 (hg17)
- Variant Calls:5
- Validation:Not tested
- Clinical Assertions: No
- Region Size:240,226
- Publication(s):Wong et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1194 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 1194 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 38 SVs from 4 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv830890 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 5,425,302 | 5,665,527 |
nsv830890 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 5,464,933 | 5,705,158 |
nsv830890 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000007.11 | Chr7 | 5,238,174 | 5,478,399 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv1445891 | copy number loss | BAC aCGH | Probe signal intensity |
nssv1445892 | copy number loss | BAC aCGH | Probe signal intensity |
nssv1445893 | copy number loss | BAC aCGH | Probe signal intensity |
nssv1445894 | copy number loss | BAC aCGH | Probe signal intensity |
nssv1445896 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv1445891 | Remapped | Perfect | NC_000007.14:g.(54 25302_?)_(?_566552 7)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 5,425,302 | 5,665,527 |
nssv1445892 | Remapped | Perfect | NC_000007.14:g.(54 25302_?)_(?_566552 7)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 5,425,302 | 5,665,527 |
nssv1445893 | Remapped | Perfect | NC_000007.14:g.(54 25302_?)_(?_566552 7)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 5,425,302 | 5,665,527 |
nssv1445894 | Remapped | Perfect | NC_000007.14:g.(54 25302_?)_(?_566552 7)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 5,425,302 | 5,665,527 |
nssv1445896 | Remapped | Perfect | NC_000007.14:g.(54 25302_?)_(?_566552 7)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 5,425,302 | 5,665,527 |
nssv1445891 | Remapped | Perfect | NC_000007.13:g.(54 64933_?)_(?_570515 8)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 5,464,933 | 5,705,158 |
nssv1445892 | Remapped | Perfect | NC_000007.13:g.(54 64933_?)_(?_570515 8)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 5,464,933 | 5,705,158 |
nssv1445893 | Remapped | Perfect | NC_000007.13:g.(54 64933_?)_(?_570515 8)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 5,464,933 | 5,705,158 |
nssv1445894 | Remapped | Perfect | NC_000007.13:g.(54 64933_?)_(?_570515 8)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 5,464,933 | 5,705,158 |
nssv1445896 | Remapped | Perfect | NC_000007.13:g.(54 64933_?)_(?_570515 8)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 5,464,933 | 5,705,158 |
nssv1445891 | Submitted genomic | NC_000007.11:g.(52 38174_?)_(?_547839 9)del | NCBI35 (hg17) | NC_000007.11 | Chr7 | 5,238,174 | 5,478,399 | ||
nssv1445892 | Submitted genomic | NC_000007.11:g.(52 38174_?)_(?_547839 9)del | NCBI35 (hg17) | NC_000007.11 | Chr7 | 5,238,174 | 5,478,399 | ||
nssv1445893 | Submitted genomic | NC_000007.11:g.(52 38174_?)_(?_547839 9)del | NCBI35 (hg17) | NC_000007.11 | Chr7 | 5,238,174 | 5,478,399 | ||
nssv1445894 | Submitted genomic | NC_000007.11:g.(52 38174_?)_(?_547839 9)del | NCBI35 (hg17) | NC_000007.11 | Chr7 | 5,238,174 | 5,478,399 | ||
nssv1445896 | Submitted genomic | NC_000007.11:g.(52 38174_?)_(?_547839 9)del | NCBI35 (hg17) | NC_000007.11 | Chr7 | 5,238,174 | 5,478,399 |