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dbVar

Database of genomic structural variation

nsv824529

Organism: Homo sapiens

Study:nstd67 (Park et al. 2010)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:788

Publication(s):Park et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 338 SVs from 34 studies. See in: genome view

Remapped(Score: Perfect):9,138,629-9,139,416

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv824529	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	9,138,629	9,139,416
nsv824529	Remapped	Perfect	GRCh38.p12	PATCHES	Second Pass	NW_018654717.1	Chr8\|NW_01 8654717.1	4,212,214	4,213,001
nsv824529	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000008.10	Chr8	8,996,139	8,996,926
nsv824529	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000008.9	Chr8	9,033,549	9,034,336

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1436775	copy number gain	NA18542	Oligo aCGH	Probe signal intensity	805

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv1436775	Remapped	Perfect	NW_018654717.1:g.( ?_4212214)_(421300 1_?)dup	GRCh38.p12	Second Pass	NW_018654717.1	Chr8\|NW_01 8654717.1	4,212,214	4,213,001
nssv1436775	Remapped	Perfect	NC_000008.11:g.(?_ 9138629)_(9139416_ ?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	9,138,629	9,139,416
nssv1436775	Remapped	Perfect	NC_000008.10:g.(?_ 8996139)_(8996926_ ?)dup	GRCh37.p13	First Pass	NC_000008.10	Chr8	8,996,139	8,996,926
nssv1436775	Submitted genomic		NC_000008.9:g.(?_9 033549)_(9034336_? )dup	NCBI36 (hg18)		NC_000008.9	Chr8	9,033,549	9,034,336

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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