nsv821825
- Organism: Homo sapiens
- Study:nstd67 (Park et al. 2010)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:846
- Publication(s):Park et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 187 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 187 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 60 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv821825 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 178,431,399 | 178,432,244 |
| nsv821825 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 179,296,126 | 179,296,971 |
| nsv821825 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000002.10 | Chr2 | 179,004,372 | 179,005,217 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1431178 | copy number gain | AK18 | Oligo aCGH | Probe signal intensity | 628 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1431178 | Remapped | Perfect | NC_000002.12:g.(?_ 178431399)_(178432 244_?)dup | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 178,431,399 | 178,432,244 |
| nssv1431178 | Remapped | Perfect | NC_000002.11:g.(?_ 179296126)_(179296 971_?)dup | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 179,296,126 | 179,296,971 |
| nssv1431178 | Submitted genomic | NC_000002.10:g.(?_ 179004372)_(179005 217_?)dup | NCBI36 (hg18) | NC_000002.10 | Chr2 | 179,004,372 | 179,005,217 |