nsv7097307
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:40,316
- Description:NC_000006.11:g.(?_110106153)_(110146468_?)dup AND Charcot-Marie-Tooth disease type 4
- Publication(s):Bird et al. 1998
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 161 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 161 SVs from 35 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv7097307 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 109,784,950 | 109,825,265 |
| nsv7097307 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 110,106,153 | 110,146,468 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv18790932 | duplication | Multiple | Multiple | Charcot-Marie-Tooth disease type 4 | Uncertain significance | ClinVar | RCV003116789.2, VCV002425991.2 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18790932 | Remapped | Perfect | NC_000006.12:g.(?_ 109784950)_(109825 265_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 109,784,950 | 109,825,265 |
| nssv18790932 | Submitted genomic | NC_000006.11:g.(?_ 110106153)_(110146 468_?)dup | GRCh37 (hg19) | NC_000006.11 | Chr6 | 110,106,153 | 110,146,468 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv18790932 | GRCh37: NC_000006.11:g.(?_110106153)_(110146468_?)dup | duplication | germline | Charcot-Marie-Tooth disease type 4 | Uncertain significance | ClinVar | RCV003116789.2, VCV002425991.2 |