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dbVar

Database of genomic structural variation

nsv6637239

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:59,129

Description:GRCh37/hg19 15q21.3(chr15:55588733-55647861)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 303 SVs from 56 studies. See in: genome view

Remapped(Score: Perfect):55,296,535-55,355,663

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6637239	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	55,296,535	55,355,663
nsv6637239	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	55,588,733	55,647,861

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv18329779	copy number loss	Multiple	Multiple	not provided	Uncertain significance	ClinVar	RCV002473511.1, VCV001808194.1	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18329779	Remapped	Perfect	NC_000015.10:g.(?_ 55296535)_(5535566 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	55,296,535	55,355,663
nssv18329779	Submitted genomic		NC_000015.9:g.(?_5 5588733)_(55647861 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	55,588,733	55,647,861

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv18329779	GRCh37: NC_000015.9:g.(?_55588733)_(55647861_?)del	copy number loss	unknown	not provided	Uncertain significance	ClinVar	RCV002473511.1, VCV001808194.1	1

No genotype data were submitted for this variant

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