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dbVar

Database of genomic structural variation

nsv6636970

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:529,619

Description:GRCh37/hg19 5q14.1(chr5:79153778-79683392)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1856 SVs from 81 studies. See in: genome view

Remapped(Score: Good):79,857,955-80,387,573

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6636970	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	79,857,955	80,387,573
nsv6636970	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	79,153,778	79,683,392

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv18328890	copy number loss	Multiple	Multiple	not provided	Uncertain significance	ClinVar	RCV002474876.1, VCV001809031.1	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18328890	Remapped	Good	NC_000005.10:g.(?_ 79857955)_(8038757 3_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	79,857,955	80,387,573
nssv18328890	Submitted genomic		NC_000005.9:g.(?_7 9153778)_(79683392 _?)del	GRCh37 (hg19)		NC_000005.9	Chr5	79,153,778	79,683,392

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv18328890	GRCh37: NC_000005.9:g.(?_79153778)_(79683392_?)del	copy number loss	unknown	not provided	Uncertain significance	ClinVar	RCV002474876.1, VCV001809031.1	1

No genotype data were submitted for this variant

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