nsv6116618
- Organism: Homo sapiens
- Study:nstd186 (NCBI Curated Common Structural Variants)
- Variant Type:copy number variation
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:251
- Description:nsv5429472 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 728 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 729 SVs from 28 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv6116618 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 1,284,432 | 1,284,682 |
nsv6116618 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 1,403,325 | 1,403,575 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv17960656 | duplication | Curated | Curated |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17960656 | Remapped | Perfect | NC_000023.11:g.128 4432_1284682dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,284,432 | 1,284,682 |
nssv17960656 | Submitted genomic | NC_000023.10:g.140 3325_1403575dup | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,403,325 | 1,403,575 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv17960656 | 0.47 | 2646 | 5626 |