nsv5956341
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 440 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 438 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 26 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5956341 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000023.11 | ChrX | 148,772,879 | 148,772,879 | ||
| nsv5956341 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | Second Pass | NC_000023.10 | ChrX | 147,854,403 | 147,854,403 |
| nsv5956341 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_004070890.2 | ChrX|NW_00 4070890.2 | 4,297,276 | 4,297,276 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17438993 | insertion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17438993 | Submitted genomic | NC_000023.11:g.148 772879_148772880in s108 | GRCh38 (hg38) | NC_000023.11 | ChrX | 148,772,879 | 148,772,879 | ||
| nssv17438993 | Remapped | Perfect | NW_004070890.2:g.4 297276_4297277ins1 08 | GRCh37.p13 | First Pass | NW_004070890.2 | ChrX|NW_00 4070890.2 | 4,297,276 | 4,297,276 |
| nssv17438993 | Remapped | Perfect | NC_000023.10:g.147 854403_147854404in s108 | GRCh37.p13 | Second Pass | NC_000023.10 | ChrX | 147,854,403 | 147,854,403 |