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dbVar

Database of genomic structural variation

nsv5955589

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 94 SVs from 23 studies. See in: genome view

Submitted genomic55,503,978-55,503,978

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5955589	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	55,503,978	55,503,978
nsv5955589	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	56,370,145	56,370,145

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17425123	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17425123	Submitted genomic		NC_000004.12:g.555 03978_55503979ins1 53	GRCh38 (hg38)		NC_000004.12	Chr4	55,503,978	55,503,978
nssv17425123	Remapped	Perfect	NC_000004.11:g.563 70145_56370146ins1 53	GRCh37.p13	First Pass	NC_000004.11	Chr4	56,370,145	56,370,145

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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