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dbVar

Database of genomic structural variation

nsv5940764

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,104,406

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 4077 SVs from 109 studies. See in: genome view

Submitted genomic15,758,291-16,862,696

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5940764	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000017.11	Chr17	15,758,291	16,862,696
nsv5940764	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000017.10	Chr17	15,661,605	16,766,010

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17370989	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17370989	Submitted genomic		NC_000017.11:g.157 58291_16862696del	GRCh38 (hg38)		NC_000017.11	Chr17	15,758,291	16,862,696
nssv17370989	Remapped	Perfect	NC_000017.10:g.156 61605_16766010del	GRCh37.p13	First Pass	NC_000017.10	Chr17	15,661,605	16,766,010

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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