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dbVar

Database of genomic structural variation

nsv5940246

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:576

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 111 SVs from 24 studies. See in: genome view

Submitted genomic41,657,024-41,657,599

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5940246	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000015.10	Chr15	41,657,024	41,657,599
nsv5940246	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	41,949,222	41,949,797

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17375224	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17375224	Submitted genomic		NC_000015.10:g.416 57024_41657599del	GRCh38 (hg38)		NC_000015.10	Chr15	41,657,024	41,657,599
nssv17375224	Remapped	Perfect	NC_000015.9:g.4194 9222_41949797del	GRCh37.p13	First Pass	NC_000015.9	Chr15	41,949,222	41,949,797

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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