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dbVar

Database of genomic structural variation

nsv5939991

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:800

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 150 SVs from 31 studies. See in: genome view

Submitted genomic56,187,617-56,188,416

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5939991	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	56,187,617	56,188,416
nsv5939991	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	56,698,986	56,699,785

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17407261	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17407261	Submitted genomic		NC_000019.10:g.561 87617_56188416del	GRCh38 (hg38)		NC_000019.10	Chr19	56,187,617	56,188,416
nssv17407261	Remapped	Perfect	NC_000019.9:g.5669 8986_56699785del	GRCh37.p13	First Pass	NC_000019.9	Chr19	56,698,986	56,699,785

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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