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dbVar

Database of genomic structural variation

nsv5939914

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:332

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 196 SVs from 23 studies. See in: genome view

Submitted genomic25,273,032-25,273,363

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5939914	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000018.10	Chr18	25,273,032	25,273,363
nsv5939914	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	22,852,996	22,853,327

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17388938	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17388938	Submitted genomic		NC_000018.10:g.252 73032_25273363del	GRCh38 (hg38)		NC_000018.10	Chr18	25,273,032	25,273,363
nssv17388938	Remapped	Perfect	NC_000018.9:g.2285 2996_22853327del	GRCh37.p13	First Pass	NC_000018.9	Chr18	22,852,996	22,853,327

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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