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dbVar

Database of genomic structural variation

nsv5928805

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,782

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 226 SVs from 62 studies. See in: genome view

Submitted genomic53,185,916-53,188,697

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5928805	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	53,185,916	53,188,697
nsv5928805	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	53,689,169	53,691,950

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17400835	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17400835	Submitted genomic		NC_000019.10:g.531 85916_53188697del	GRCh38 (hg38)		NC_000019.10	Chr19	53,185,916	53,188,697
nssv17400835	Remapped	Perfect	NC_000019.9:g.5368 9169_53691950del	GRCh37.p13	First Pass	NC_000019.9	Chr19	53,689,169	53,691,950

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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