nsv592827
- Organism: Homo sapiens
- Study:nstd54 (Cooper et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:8,701
- Publication(s):Cooper et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 471 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 471 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 225 SVs from 25 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv592827 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 191,346,739 | 191,355,439 |
| nsv592827 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 191,064,528 | 191,073,228 |
| nsv592827 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 192,547,222 | 192,555,922 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv983582 | copy number loss | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv983582 | Remapped | Perfect | NC_000003.12:g.(?_ 191346739)_(191355 439_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 191,346,739 | 191,355,439 |
| nssv983582 | Remapped | Perfect | NC_000003.11:g.(?_ 191064528)_(191073 228_?)del | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 191,064,528 | 191,073,228 |
| nssv983582 | Submitted genomic | NC_000003.10:g.(?_ 192547222)_(192555 922_?)del | NCBI36 (hg18) | NC_000003.10 | Chr3 | 192,547,222 | 192,555,922 |