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dbVar

Database of genomic structural variation

nsv5906116

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:55

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 248 SVs from 37 studies. See in: genome view

Submitted genomic197,870,732-197,870,786

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5906116	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	197,870,732	197,870,786
nsv5906116	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	197,597,603	197,597,657

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17422540	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17422540	Submitted genomic		NC_000003.12:g.197 870732_197870786de l	GRCh38 (hg38)		NC_000003.12	Chr3	197,870,732	197,870,786
nssv17422540	Remapped	Perfect	NC_000003.11:g.197 597603_197597657de l	GRCh37.p13	First Pass	NC_000003.11	Chr3	197,597,603	197,597,657

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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