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dbVar

Database of genomic structural variation

nsv5905456

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,722

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 223 SVs from 46 studies. See in: genome view

Submitted genomic80,610,065-80,614,786

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5905456	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	80,610,065	80,614,786
nsv5905456	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	81,531,219	81,535,940

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17428875	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17428875	Submitted genomic		NC_000004.12:g.806 10065_80614786del	GRCh38 (hg38)		NC_000004.12	Chr4	80,610,065	80,614,786
nssv17428875	Remapped	Perfect	NC_000004.11:g.815 31219_81535940del	GRCh37.p13	First Pass	NC_000004.11	Chr4	81,531,219	81,535,940

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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