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dbVar

Database of genomic structural variation

nsv5899619

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:59

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 117 SVs from 32 studies. See in: genome view

Submitted genomic109,221,101-109,221,159

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5899619	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	109,221,101	109,221,159
nsv5899619	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	110,142,257	110,142,315

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17423963	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17423963	Submitted genomic		NC_000004.12:g.109 221101_109221159de l	GRCh38 (hg38)		NC_000004.12	Chr4	109,221,101	109,221,159
nssv17423963	Remapped	Perfect	NC_000004.11:g.110 142257_110142315de l	GRCh37.p13	First Pass	NC_000004.11	Chr4	110,142,257	110,142,315

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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