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dbVar

Database of genomic structural variation

nsv5898190

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52,475

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 291 SVs from 48 studies. See in: genome view

Submitted genomic133,269,095-133,321,569

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5898190	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	133,269,095	133,321,569
nsv5898190	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	134,026,667	134,079,141

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17406542	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17406542	Submitted genomic		NC_000002.12:g.133 269095_133321569de l	GRCh38 (hg38)		NC_000002.12	Chr2	133,269,095	133,321,569
nssv17406542	Remapped	Perfect	NC_000002.11:g.134 026667_134079141de l	GRCh37.p13	First Pass	NC_000002.11	Chr2	134,026,667	134,079,141

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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