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dbVar

Database of genomic structural variation

nsv5894438

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:86

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 138 SVs from 29 studies. See in: genome view

Submitted genomic215,107,074-215,107,159

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5894438	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	215,107,074	215,107,159
nsv5894438	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	215,971,797	215,971,882

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17393269	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17393269	Submitted genomic		NC_000002.12:g.215 107074_215107159de l	GRCh38 (hg38)		NC_000002.12	Chr2	215,107,074	215,107,159
nssv17393269	Remapped	Perfect	NC_000002.11:g.215 971797_215971882de l	GRCh37.p13	First Pass	NC_000002.11	Chr2	215,971,797	215,971,882

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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