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dbVar

Database of genomic structural variation

nsv5894364

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,348

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 121 SVs from 31 studies. See in: genome view

Submitted genomic87,429,239-87,433,586

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5894364	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000006.12	Chr6	87,429,239	87,433,586
nsv5894364	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	88,138,957	88,143,304

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17445393	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17445393	Submitted genomic		NC_000006.12:g.874 29239_87433586del	GRCh38 (hg38)		NC_000006.12	Chr6	87,429,239	87,433,586
nssv17445393	Remapped	Perfect	NC_000006.11:g.881 38957_88143304del	GRCh37.p13	First Pass	NC_000006.11	Chr6	88,138,957	88,143,304

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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