Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5893603

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:54

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 177 SVs from 34 studies. See in: genome view

Submitted genomic181,208,256-181,208,309

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5893603	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	181,208,256	181,208,309
nsv5893603	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	180,635,256	180,635,309

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17428761	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17428761	Submitted genomic		NC_000005.10:g.181 208256_181208309de l	GRCh38 (hg38)		NC_000005.10	Chr5	181,208,256	181,208,309
nssv17428761	Remapped	Perfect	NC_000005.9:g.1806 35256_180635309del	GRCh37.p13	First Pass	NC_000005.9	Chr5	180,635,256	180,635,309

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI